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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 579 Check: 0 ..
Name: MRPL11 Len: 579 Check: 9927 Weight: 0.68
Name: MRPL11P2 Len: 579 Check: 6523 Weight: 0.68
Name: MRPL11P1 Len: 579 Check: 515 Weight: 1.31
Name: MRPL11P3 Len: 579 Check: 2544 Weight: 1.34
Name: Consensus Len: 579 Check: 9290 Weight: 0.00
//
1 130
MRPL11 ATGTCAAAGC TCGGCCGGGC CGCCCGGGGC CTCAGGAAGC CCGAGGTCGG CGGTGTGATC CGGGCGATCG TGCGGGCAGG CCTGGCCATG CCTGGGCCCC CACTAGGCCC AGTGCTGGGT CAGAGAGGCG
MRPL11P2 ATGTCAAAGT TCGGCCGGGC CACCCGGGGC CTCAGGAAGC CCGAGGTCGG CGATGTGATC CGGACCATCG TGCGGGCAGG CCTGGCCATG CCCGGGCCCC CACTAGGCCC AGTGCTGGGT CAGAGAAGGG
MRPL11P1
MRPL11P3
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
131 260
MRPL11 TTTCCATCAA CCAGTTTTGC AAGGAGTTCA ATGAGAGGAC AAAGGACATC AAGGAAGGCA TTCCTCTGCC TACCAAGATT TTAGTGAAGC CTGACAGGAC ATTTGAAATT AAGATTGGAC AGCCCACTGT
MRPL11P2 CTTCCATCAA CCAATTTTGC AAGGAGTTCA ATGAGAGGAC AAAGGACATC AAGGAAGGCA TTCCTCTGCT TACCAAGATT TTTCTGAAGC CTGACGGGAC ATTTGAAATC AAGATTGGAC AACCCACTGT
MRPL11P1
MRPL11P3
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
261 390
MRPL11 TTCCTACTTC CTGAAGGCAG CAGCTGGGAT TGAAAAGGGG GCCCGGCAAA CAGGGAAAGA GGTGGCAGGC CTGGTGACCT TGAAGCATGT GTATGAGATT GCCCGCATCA AAGCTCAGGA TGAGGCATTT
MRPL11P2 TTCCTACTTC GTGAAGGCAG CAGCTGGGAT TGAAAAGGGG GCCCGGCCAA CAG------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
MRPL11P1
MRPL11P3
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
391 520
MRPL11 GCCCTGCAGG ATGTACCCCT GTCGTCTGTT GTCCGCTCCA TCATCGGGTC TGCCCGTTCT CTGGGCATTC GCGTGGTGAA GGACCTCAGT TCAGAAGAGC TTGCAGCTTT CCAGAAGGAA CGAGCCATCT
MRPL11P2 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---CCTCAGT TCAGAAGAGT TTGCAGCTTT CCAGAAGGAA CAAGCCATCT
MRPL11P1 CCTCAGT TCAGAAGAGC TTGCAGCTTT CCAGAAGGAA CGAGCCATCT
MRPL11P3 C AAACATGATT TCATTAATGC TGGCAGCTTT CCAGAAGGAG CAAGCCATAT
Consensus .......... .......... .......... .......... .......... .......... .......... .......... ..aCcTcAgT TCAgaAgaGc TtGCAGCTTT CCAGAAGGAa CaAGCCATcT
521 579
MRPL11 TCCTGGCTGC TCAGAAGGAG GCAGATTTGG CTGCCCAAGA AGAAGCTGCC AAGAAGTGA
MRPL11P2 TCCTGGCTGC TCAGAAGAAG GCAGATTTGG CCACCCAGGA GGAAGCTGCC AAGAAGTGA
MRPL11P1 TCCTGGCTGC TCAGAAGGAG GCAGATTTGG CTGCCCAAGA AGAAGCTGCC AAGAAGTGA
MRPL11P3 TCCTGGCTGA TCAGAAAGAG GCAGATTTGG CAGCCCAGGG AGAAGCTGCC AAGAAGTGA
Consensus TCCTGGCTGc TCAGAAggAG GCAGATTTGG C.gCCCAgGa aGAAGCTGCC AAGAAGTGA