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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 892 Check: 0 ..
Name: MRPL15 Len: 892 Check: 7362 Weight: 1.23
Name: MRPL15P1 Len: 892 Check: 4247 Weight: 0.88
Name: MRPL15P2 Len: 892 Check: 2518 Weight: 0.88
Name: Consensus Len: 892 Check: 3544 Weight: 0.00
//
1 130
MRPL15 ATGGCCGGTC CCTTGCAGGG CGGTGGGGCC CGGGCCCTGG ACCTACTCCG GGGCCTGCCG CGTGTGAGCC TGGCCAACTT AAAGCCGAAT CCCGGCTCCA AGAAACCGGA GAGAAGACCA AGAGGTCGGA
MRPL15P1 AGCTCTG GGCCCTGCTG CGCATGAGCC TGACCAATTT AAAGCGGAAT CCTGGCTCCA GGAAACCCAT GAGACGACCA AAAGGTCGGA
MRPL15P2 AGCTCTG GGCCCTGCTG CGCATGAGCC TGACCAATTT AAAGCGGAAT CCTGGCTCCA GGAAACCCAT GAGACGACCA AAAGGTCGGA
Consensus .......... .......... .......... .......... ...agCTCtG GGcCCTGCtG CGcaTGAGCC TGaCCAAtTT AAAGCgGAAT CCtGGCTCCA gGAAACCcat GAGAcGACCA AaAGGTCGGA
131 260
MRPL15 GAAGAGGTAG AAAATGTGGC AGAGGCCATA AAGGAGAAAG GCAAAGAGGA ACCCGGCCCC GCTTGGGCTT TGAGGGAGGC CAGACTCCAT TTTACATCCG AATCCCAAAA TACGGGTTTA ACGAAGGACA
MRPL15P1 GAAGAGGTAG AAAATGCGGC AGAGGCCATA AAAGAGAAAG GCAGAGAGGA AACTGGCTCT GCT-GGGCTT TGGGGATGGC CAGACTCTAT TTTACATCGG AATCCCAAAA TACAGATTTA ATGAAGGACT
MRPL15P2 GAAGAGGTAG AAAATGCGGC AGAGGCCATA AAAGAGAAAG GCAGAGAGGA AACTGGCTCT GCT-GGGCTT TGGGGATGGC CAGACTCTAT TTTACATCGG AATCCCAAAA TACAGATTTA ATGAAGGACT
Consensus GAAGAGGTAG AAAATGcGGC AGAGGCCATA AAaGAGAAAG GCAgAGAGGA AaCtGGCtCt GCT.GGGCTT TGgGGatGGC CAGACTCtAT TTTACATCgG AATCCCAAAA TACaGaTTTA AtGAAGGACt
261 390
MRPL15 TAGTTTCAGA CGCCAGTATA AGCCTTTGAG TCTCAATAGA CTGCAGTATC TTATTGATTT GGGTCGTGTT GATCCTAGTC AACCTATTGA CTTAACCCAG CTTGTCAATG GGAGAGGTGT GACCATCCAG
MRPL15P1 TAGCTTCAGA CACCAGTATC AACCTTTAAG TATCAATAGA CTGTAATATG TTACTGATTT GGGTCGTGTT GATCCTACTC AACCTATTGA CTTAACCCAG CTTGTCAATG GAAGAGGTGT GACCATTCAG
MRPL15P2 TAGCTTCAGA CACCAGTATC AACCTTTAAG TATCAATAGA CTGTAATATG TTACTGATTT GGGTCGTGTT GATCCTACTC AACCTATTGA CTTAACCCAG CTTGTCAATG GAAGAGGTGT GACCATTCAG
Consensus TAGcTTCAGA CaCCAGTATc AaCCTTTaAG TaTCAATAGA CTGtAaTATg TTAcTGATTT GGGTCGTGTT GATCCTAcTC AACCTATTGA CTTAACCCAG CTTGTCAATG GaAGAGGTGT GACCATtCAG
391 520
MRPL15 CCACTTAAAA GGGATTATGG TGTCCAGCTG GTTGAGGAGG GTGCTGACAC CTTTACGGCA AAAGTTAATA TTGAAGTACA GTTGGCTTCA GAACTAGCTA TTGCTGCCAT TGAAAAAAAT GGTGGTGTTG
MRPL15P1 CCACTTAAAG AGGATTATGG TGTTCAGCTG GTCGAAAAGG CCGCAGACAC CTTTCAGGTA AAAGTTAATA TTGAAGTACA GTTGGCTTCA GAACTAGCTA TTGCTGCAAT TGAAAAAAAT GGTGGTGGTG
MRPL15P2 CCACTTAAAG AGGATTATGG TGTTCAGCTG GTCGAAAAGG CCGCAGACAC CTTTCAGGTA AA-GTTAATA TTGAAGTACA GTTGGCTTCA GAACTAGCTA TTGCTGCAAT TGAAAAAAAT GGTGGTGGTG
Consensus CCACTTAAAg aGGATTATGG TGTtCAGCTG GTcGAaaAGG ccGCaGACAC CTTTcaGGtA AAaGTTAATA TTGAAGTACA GTTGGCTTCA GAACTAGCTA TTGCTGCaAT TGAAAAAAAT GGTGGTGgTG
521 650
MRPL15 TTACTACAGC CTTCTATGAT CCAAGAAGTC TGGACATTGT ATGCAAACCT GTTCCATTCT TTCTTCGTGG ACAACCCATT CCAAAAAGAA TGCTTCCACC AGAAGAACTG GTACCATATT ACACTGATGC
MRPL15P1 TCACTACAGC CTTACAGGAT CCAAGAAGTC TGGAAATTCT ATCCAAACCT GTTCCATTCT TTTT--GGAG ACAACCCATT CCAAAAAGAA TGCTTCCTTC TGAAGCACTG GTACCATATT CCACCAATGC
MRPL15P2 TCACTACAGC CTTACAGGAT CCAAGAAGTC TGGAAATTCT ATCCAAACCT GTTCCATTCT TTTT--GGAG ACAACCCATT CCAAAAAGAA TGCTTCCTTC TGAAGCACTG GTACCATATT CCACCAATGC
Consensus TcACTACAGC CTTacAgGAT CCAAGAAGTC TGGAaATTcT ATcCAAACCT GTTCCATTCT TTtT..GgaG ACAACCCATT CCAAAAAGAA TGCTTCCttC tGAAGcACTG GTACCATATT cCACcaATGC
651 780
MRPL15 AAAGAACCGT GGGTACCTGG CGGATCCTGC CAAATTTCCT GAAGCACGAC TTGAACTCGC CAGGAAGTAT GGTTATATCT TACCTGATAT CACTAAAGAT GAACTCTTCA AAATGCTCTG TACTAGGAAG
MRPL15P1 AAAGAATCGT GGGAACCTGG CAGATCCTGC CAAATTTCCT GAAGCACAAC TTGAGCTTGC CAGGAAGGAC AGTTCTAATT TACTGGATAT CACGAAAGAA GAACTCTTCA AA-TGTTCAG TACTCAGAAG
MRPL15P2 AAAGAATCGT GGGAACCTGG CAGATCCTGC CAAATTTCCT GAAGCACAAC TTGAGCTTGC CAGGAAGGAC AGTTCTAATT TACTGGATAT CACGAAAGAA GAACTCTTCA AA-TGTTCAG TACTCAGAAG
Consensus AAAGAAtCGT GGGaACCTGG CaGATCCTGC CAAATTTCCT GAAGCACaAC TTGAgCTtGC CAGGAAGgAc aGTTcTAatT TACtgGATAT CACgAAAGAa GAACTCTTCA AA.TGtTCaG TACTcaGAAG
781 892
MRPL15 GATCCAAGGC AGATTTTCTT TGGTCTTGCT CCAGGATGGG TGGTGAATAT GGCCGATAAG AAAATCCTAA AACCTACAGA TGAAAATCTC CTTAAGTATT ATACCTCATG A
MRPL15P1 GATCCAAGGC AGATTTTCTT TGAGTTTGCT CCAGGATGGG TGCTGAATAT AGTAGATAAG AAAATCCTAA CATCTACAGA TGAAAATCTC CTCAAGTACT AGAGCTCATG AA
MRPL15P2 GATCCAAGGC AGATTTTCTT TGAGTTTGCT CCAGGATGGG TGCTGAATAT AGTAGATAAG AAAATCCTAA CATCTACAGA TGAAAATCTC CTCAAGTACT AGAGCTCATG A
Consensus GATCCAAGGC AGATTTTCTT TGagtTTGCT CCAGGATGGG TGcTGAATAT aGtaGATAAG AAAATCCTAA cAtCTACAGA TGAAAATCTC CTcAAGTAcT AgAgCTCATG A.