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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 921 Check: 0 ..
Name: MRPL2 Len: 921 Check: 8181 Weight: 1.00
Name: MRPL2P1 Len: 921 Check: 8441 Weight: 1.00
Name: Consensus Len: 921 Check: 3693 Weight: 0.00
//
1 130
MRPL2 ATGGCCCTGT GCGCACTGAC CCGCGCTCTG CGCTCTCTGA ACCTGGCGCC CCCGACCGTC GCCGCCCCTG CCCCGAGTCT GTTCCCCGCC GCCCAGATGA TGAACAATGG CCTCCTCCAA CAGCCCTCTG
MRPL2P1 ATGGCCCTGT GGGCACTGAC CTGCACTCTG CACTCTCTGA GCCTGGCACC CCCGACCGTT GCCACTTCTG TCCCGAGTCT GTTCCCTGCC TCCCAGGTGA TGAACAATGC CCTCTTCCAA TGGCCCTCTG
Consensus ATGGCCCTGT GcGCACTGAC CcGCaCTCTG CaCTCTCTGA aCCTGGCaCC CCCGACCGTc GCCaCccCTG cCCCGAGTCT GTTCCCcGCC gCCCAGaTGA TGAACAATGc CCTCcTCCAA caGCCCTCTG
131 260
MRPL2 CCTTGATGTT GCTCCCCTGC CGCCCAGTTC TTACTTCTGT GGCCCTTAAT GCCAACTTTG TGTCCTGGAA GAGTCGTACC AAGTACACCA TTACACCAGT GAAGATGAGG AAGTCTGGGG GCCGAGACCA
MRPL2P1 CCTTGATGTT GCTCCCCTGC CACCAAATCC TTACTTCTAT GGCCCTTAGT GCCAACTTTG TGCCTTGAAA GAGTCATACC AAGTACACAA TTAAACCAGT GAAGATGAGG AAGTCTGGGG GTGAAGACCA
Consensus CCTTGATGTT GCTCCCCTGC CaCCaAaTcC TTACTTCTaT GGCCCTTAaT GCCAACTTTG TGcCcTGaAA GAGTCaTACC AAGTACACaA TTAaACCAGT GAAGATGAGG AAGTCTGGGG GccaAGACCA
261 390
MRPL2 CACAGGCCGA ATCCGGGTGC ATGGTATTGG CGGGGGCCAC AAGCAACGTT ATCGAATGAT TGACTTTCTG CGTTTCCGGC CTGAGGAG-- -ACCAAGTCA GGACCCTTTG AGGAGAAGGT TATCCAAGTC
MRPL2P1 CACAGGCCAG ATCTGGGTGC ACGGTATTGA CAGGGGCCAC AAGCAACATT ATTGCATGAT TGACTTT-TG TGTTTCTGGC CTGAGGAGGA GACCAAGTCA GGACCCTTTG AGGAGAAGGT TATCCAAGTC
Consensus CACAGGCCaa ATCcGGGTGC AcGGTATTGa CaGGGGCCAC AAGCAACaTT ATcGaATGAT TGACTTT.TG cGTTTCcGGC CTGAGGAG.. .ACCAAGTCA GGACCCTTTG AGGAGAAGGT TATCCAAGTC
391 520
MRPL2 CGCTATGATC CCTGTAGGTC AGCAGACATA GCTCTGGTTG CTGGGGGCAG CCGGAAACGC TGGATCATCG CCACAGAAAA CATGCAGGCT GGAGATACAA TCTTGAACTC TAACCACATA GGCCGAATGG
MRPL2P1 CACCGTGATC CCTGTAGGTC AGCAGACATA GCTCTGGTTG CTGGGGGTAG CCAGAAACAC TGGATCATCA CCACAGAAAA CTTGCAGGCT GGAGATACAA TCCTGAACTC CAACCACATA GGCCAAATGG
Consensus CaCcaTGATC CCTGTAGGTC AGCAGACATA GCTCTGGTTG CTGGGGGcAG CCaGAAACaC TGGATCATCa CCACAGAAAA CaTGCAGGCT GGAGATACAA TCcTGAACTC cAACCACATA GGCCaAATGG
521 650
MRPL2 CAGTTGCTGC TCGGGAAGGG GATGCGCATC CTCTTGGGGC TCTGCCTGTG GGGACCCTCA TCAACAACGT GGAAAGTGAG CCAGGCCGGG GTGCCCAATA TATCCGAGCT GCAGGGACGT GTGGTGTGCT
MRPL2P1 CAGTTGCTGC TCAGGAAGGG GATGCACATC CACTTGGGGC TCTGCCTGTG GGAACCCTCA TCAACAACAT GGAAATTGAG CCAGGCCGGG GTGCCCAGTA TATCCAAGCT GCAGGGACGT GTAGTGTGCT
Consensus CAGTTGCTGC TCaGGAAGGG GATGCaCATC CaCTTGGGGC TCTGCCTGTG GGaACCCTCA TCAACAACaT GGAAAgTGAG CCAGGCCGGG GTGCCCAaTA TATCCaAGCT GCAGGGACGT GTaGTGTGCT
651 780
MRPL2 ACTGCGGAAG GTGAATGGCA CAGCCATTAT CCAGCTGCCC TCTAAGAGGC AGATGCAGGT GCTGGAAACG TGCGTAGCAA CAGTAGGCCG AGTATCCAAC GTTGATCATA ACAAACGGGT CATTGGCAAG
MRPL2P1 ACTGTGGAAG GTGAATGGCA CAACCGTTAT CCAGCTGCCC TCTAAGAGGC AGATGCAGGT GCTGGAAACA TGCATAGCAA CAGTAGGCTG AGTATCCAAC ACTGATCATA ACAAACAGGT CACTGGCAGG
Consensus ACTGcGGAAG GTGAATGGCA CAaCCaTTAT CCAGCTGCCC TCTAAGAGGC AGATGCAGGT GCTGGAAACa TGCaTAGCAA CAGTAGGCcG AGTATCCAAC acTGATCATA ACAAACaGGT CAcTGGCAaG
781 910
MRPL2 GCAGGTCGCA ACCGCTGGCT GGGCAAGAGG CCTAACAGTG GGCGGTGGCA CCGCAAGGGG GGCTGGGCTG GCCGAAAGAT TCGGCCACTA CCCCCCATGA AGAGTTACGT GAAGCTGCCT TCTGCTTCTG
MRPL2P1 GCAGGTCACA ACCGTTGGCT GGGCAAGAGG CCTTCCAGTG GGCTACAGCA CCACAAGGGG TGCTGGGCTG GCCGAAAGAT TTGGCCACTA CCCTTCATGA AGAGTTATGT GAAGCTGCCT TCTGATGCTG
Consensus GCAGGTCaCA ACCGcTGGCT GGGCAAGAGG CCTaaCAGTG GGCgacaGCA CCaCAAGGGG gGCTGGGCTG GCCGAAAGAT TcGGCCACTA CCCccCATGA AGAGTTAcGT GAAGCTGCCT TCTGaTgCTG
911 921
MRPL2 CCCAAAGCTG A
MRPL2P1 CCCAAAGCTG A
Consensus CCCAAAGCTG A