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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 476 Check: 0 ..
Name: MRPL20 Len: 476 Check: 1201 Weight: 1.00
Name: MRPL20P1 Len: 476 Check: 5127 Weight: 1.00
Name: Consensus Len: 476 Check: 4614 Weight: 0.00
//
1 130
MRPL20 ATGGTCTTC CTCAC-CGCG CAGCTCTG-- ---------G CTGCGGAATC GCGTCACCGA CCGCTACTTT CGGATCCAGG AGGTGCTGAA GCACGCCAGG CACTTCCGGG GAAGGAA--- ----------
MRPL20P1 CCAGGACGCT GGCCCGCGGG CGTCTTGGTC TTCTTCACCG CTGCGAAATC GCGTCACCTA CCGCTACTGG CGGATTCGGG AGGTGCTGAA GCACGCCAAG CACTTCCGGC GGGGGAGCGG GGTGCGGGGG
Consensus .aaGGaCgcc cgCaC.CGcG CagCTcgG.. .........G CTGCGaAATC GCGTCACCgA CCGCTACTgg CGGATcCaGG AGGTGCTGAA GCACGCCAaG CACTTCCGGc GaaGGAa... ..........
131 260
MRPL20 AAATCGCTGC TACAGGTTGG CGGTCAGAAC CGTGATTCGA GCCTTTGTGA AATGCACCAA AGCCCGATAC CTGAAGAAAA AGAACATGAG GACCCTCTGG ATTAATCGAA TTACAGCTGC TAGCCAGGAA
MRPL20P1 AAATTGCTGC TACAGGTTGG CGGTCAGAGC CGGGACTGGA GCCTTTGTGA AATGCACCAA AGCCGGAAAC CTGAAGAAGA GGACCATGAG GACCCTCTGG ATTAATCGAA TTACAGCTGC TACCCAGGAA
Consensus AAATcGCTGC TACAGGTTGG CGGTCAGAaC CGgGAcTcGA GCCTTTGTGA AATGCACCAA AGCCcGAaAC CTGAAGAAaA aGAaCATGAG GACCCTCTGG ATTAATCGAA TTACAGCTGC TAcCCAGGAA
261 390
MRPL20 CATGGACTGA AGTATCCAGC GCTCATTGGG AATTTAGTTA AGTGCCAGGT GGAGCTCAAC AGGAAAGTCC TAGCGGATCT GGCCATCTAC GAGCCAAAGA CTTTCAAATC TTTGGCTGCC TTGGCCAGTA
MRPL20P1 CACGGCCCGA AGTACCCAGC GTTCACTGGC AATTTAATTA AGTGCCAGGT GAAGCGCCAC AAGAAAGTCC CAGCGAATCT GGCCATCTAC GAACCAGAGA CTTTTAAATC TTTGGCTGCC TTGGCCAATA
Consensus CAcGGaCcGA AGTAcCCAGC GcTCAcTGGc AATTTAaTTA AGTGCCAGGT GaAGCgCaAC AaGAAAGTCC cAGCGaATCT GGCCATCTAC GAaCCAaAGA CTTTcAAATC TTTGGCTGCC TTGGCCAaTA
391 476
MRPL20 GGAGGCGACA CGAAGGATTT GCTGCTGCCT TGGGGGATGG GAAGGAACCT GAAGGCATTT TTTCCAGAGT GGTGCAGTAC CACTGA
MRPL20P1 GGAGGCGACA GGAAGAATTT GCTGCTGCCT TAGGAGATGG GAAGGCAGCA TA------TT TTTCCAGAAT GGTACAGTAC CGCTGA
Consensus GGAGGCGACA cGAAGaATTT GCTGCTGCCT TaGGaGATGG GAAGGaAcCa gA......TT TTTCCAGAaT GGTaCAGTAC CaCTGA