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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 698 Check: 0 ..
Name: MRPL22 Len: 698 Check: 12 Weight: 0.75
Name: MRPL22P1 Len: 698 Check: 929 Weight: 0.75
Name: MRPL22P2 Len: 698 Check: 9533 Weight: 1.49
Name: Consensus Len: 698 Check: 9872 Weight: 0.00
//
1 130
MRPL22 ATGGCGGCGG CAGTACTGGG ACAGTTGGGT GCGTTATGGA TACATAACCT GAGGAGCCGG GGGAAGCTGG CCTTGGGTGT TTTACCTCAA TCATATATCC ACACAAGTGC TTCTCTTGAC ATTTCTCGAA
MRPL22P1 ATAGTGGTTG CAGTACTGGA ACAGCTGGGT GCAATGTGGA CGCAGTGGCC TTGGCA---- GGTCTCCTTC ATCTCAGCAT TTTACCCCAA TCCCAGGTCC ACACAAGTGC TTCTCTTGAC ACTTCTCAAA
MRPL22P2
Consensus at.g.gg..g cagtactgg. acag.tgggt gc..t.tgga ..ca....c. ..gg...... gg....ct.. ...t..g..t tttacc.caa tc..a..tcc acacaagtgc ttctcttgac a.ttctc.aa
131 260
MRPL22 AATGGGAGAA GAAGAATAAA ATTGTTTATC CTCCACAACT GCCTGGAGAA CCTCGGAGAC CAGCAGAAAT CTACCACTGT CGAAGACAAA TAAAATATAG CAAAGACAAG ATGTGGTATT TGGCAAAATT
MRPL22P1 AATGGGAGAA GAAGAATAAA ACCGTTTATC CTCCACAACT GCCTGCAGAA CCTCAGAGAC CAGCAGAAAT CTACCAATAC CAAAGAAAAC TAAAAGACAG CAAAGACAAG ATGTTGTATT TGGCAAAATT
MRPL22P2 GAAAT CTACCACTGT CGAAGACAAA TAAAATATAG CAAAGACAAG ATGTGGTATT TGGCAAAATT
Consensus aatgggagaa gaagaataaa a..gtttatc ctccacaact gcctg.agaa cctc.gagac cagcaGAAAT CTACCAcTgt CgAAGAcAAa TAAAAtAtAG CAAAGACAAG ATGTgGTATT TGGCAAAATT
261 390
MRPL22 GATACGAGGA ATGTCTATTG ACCAGGCTTT GGCTCAGTTG GAATTCAATG ACAAAAAAGG GGCCAAAATA ATTAAAGAGG TTCTCTTAGA AGCACAAGAT ATGGCAGTGA GAGACCATAA CGTGGAATTC
MRPL22P1 GGTAGGAGAA ATGTCCACTG ACCAGGCTTA G-CTCAACTG GGATTCAGCG ACAAAAA-GG GACCCAAATC ATTAAAGATG TTCTCTTAGA AGCACAAGAC GTGGCAGTGA AAGACCACAA TGTGGAATTC
MRPL22P2 GGTAAG
Consensus GgTA.Gag.a atgtc.a.tg accaggctt. g.ctca..tg g.attca..g acaaaaa.gg g.cc.aaat. attaaaga.g ttctcttaga agcacaaga. .tggcagtga .agacca.aa .gtggaattc
391 520
MRPL22 AGGTCCAATT TATATATAG- CTGAGTCCAC CTCAGGACGA GGCCAGTGCC TGAAACGCAT CCGCTACCAT GGCAGAGGTC GCTTTGGGAT CATGGAGAAG GTTTATTGCC ATTATTTTGT GAAGTTGGTG
MRPL22P1 AGATCTGGTT TATATATAAA CTGAGTCCAC CTCAGGGGGA GGCCAGATCC TGACAGGCTT CTGCTACCAA AGTAGAGGTT GCTTTGGGAT CATGAAGG-- --TTACTGCC ATTATTTTAT GAAGCTGGTG
MRPL22P2
Consensus ag.tc...tt tatatata.. ctgagtccac ctcagg..ga ggccag..cc tga.a.gc.t c.gctacca. .g.agaggt. gctttgggat catg.ag... ..tta.tgcc attatttt.t gaag.tggtg
521 650
MRPL22 GAAGGGCC-- CCCACCTCCA CCTGAGCCAC CAAAGACGGC --AGTTGCCC ATGCCAAAGA GTATAT--TC AGCAG-TTCG CAGCCGGACC ATCGTTCACA CTCT-ATGAT GAGGAGATTC AG--ACTCCA
MRPL22P1 GAAGGGCCTC CCCACCTCCA CGTGAGGCAC CCAAGATGGC GAAGTCACCC ATACCAAAGA GTATATATTC AGAAGCTTCA ACACTGGACC ATCACTCACA CTATGATGGG GCTGTGATAA CGGAAGATCA
MRPL22P2
Consensus gaagggcc.. cccacctcca c.tgag.cac c.aaga.ggc ..agt..ccc at.ccaaaga gtatat..tc ag.ag.ttc. ...c.ggacc atc..tcaca ct.t.atg.. g..g.gat.. .g..a...ca
651 698
MRPL22 CAGTGTATAT ATTTTGCCAT TTATTTTCTA AAAATAAACA AAAATTGA
MRPL22P1 CTTAGTCTAG GAAAGAACTC CTCCATGTGC CATCATAACC ACTGTAGG
MRPL22P2
Consensus c...gt.ta. .......c.. .t...t.... .a....aac. a...t.g.