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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 567 Check: 0 ..
Name: MRPL32 Len: 567 Check: 8012 Weight: 1.00
Name: MRPL32P1 Len: 567 Check: 436 Weight: 1.00
Name: Consensus Len: 567 Check: 5358 Weight: 0.00
//
1 130
MRPL32 ATGGCGCTGG CCATGCTGGT CTTGGTGGTT TCGCCGTGGT CTGCGGCCCG GGGAGTGCTT CGAAACTACT GGGAGCGACT GCTACGGAAG CTTCCGCAGA GCCGGCCGGG CTTTCCCAGT CCTCCGTGGG
MRPL32P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
131 260
MRPL32 GACCAGCATT AGCAGTACAG GGCCCAGCCA TGTTTACAGA GCCAGCAAAT GATACCAGTG GAAGTAAAGA GAATTCCAGC CTTTTGGACA GTATCTTTTG GATGGCAGCT CCCAAAAATA GACGCACCAT
MRPL32P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
261 390
MRPL32 TGAAGTTAAC CGGTGTAGGA GAAGAAATCC GCAGAAGCTT ATTAAAGTTA AGAACAACAT AGACGTTTGT CCTGAATGTG GTCACCTGAA ACAGAAACAT GTCCTTTGTG CCTACTGCTA TGAAAAGGTG
MRPL32P1 TGTA CTTACATTTA AAAA--ATAT AGACATTTGT TCTGAATGTG ATCACCTGTA ACAGAAACAT GTCCTTTGGG GCCACTGCTA TGAGAAGGTG
Consensus .......... .......... .......... ......gcTa aTTAaAgTTA AaAA..AcAT AGACaTTTGT cCTGAATGTG aTCACCTGaA ACAGAAACAT GTCCTTTGgG cCcACTGCTA TGAaAAGGTG
391 520
MRPL32 TGCAAGGAGA CTGCAGAAAT CAGACGACAG ATAGGGAAGC AAGAAGGGGG CCCTTTTAAG GCTCCCACCA TAGAGACTGT GGTGCTGTAC ACAGGAGAGA CACCGTCTGA ACAAGATCAG GGCAAGAGGA
MRPL32P1 GGCAGGGACA CTGCAGAAGT CAGACGACAG ATAGGGAAAC AAGA---GGG CCCTTTTAAG GCTCCCACTG TAGAGACTAT GGTGTTGTAC ATGGGAGCGA CGCTGTCTGA ACAAGATCAG GG--TGAGGA
Consensus gGCAaGGAcA CTGCAGAAaT CAGACGACAG ATAGGGAAaC AAGA...GGG CCCTTTTAAG GCTCCCACca TAGAGACTaT GGTGcTGTAC AcaGGAGaGA CaCcGTCTGA ACAAGATCAG GG..aGAGGA
521 567
MRPL32 TCATTGAACG AGACAGAAAG CGACCATCCT GGTTCACCCA GAATTGA
MRPL32P1 TCATAGAACG AGACAGGAAG CAGCCATCCT GGTTCACCCA CAATTAA
Consensus TCATaGAACG AGACAGaAAG CaaCCATCCT GGTTCACCCA cAATTaA