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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 373 Check: 0 ..
Name: MRPL35 Len: 373 Check: 4536 Weight: 0.88
Name: MRPL35P3 Len: 373 Check: 9555 Weight: 0.88
Name: MRPL35P2 Len: 373 Check: 8476 Weight: 0.97
Name: MRPL35P1 Len: 373 Check: 2671 Weight: 1.05
Name: MRPL35P4 Len: 373 Check: 7982 Weight: 1.22
Name: Consensus Len: 373 Check: 7176 Weight: 0.00
//
1 130
MRPL35 ATGGCTGCCT CTGCCTTTGC TGGTGCAGTG AGAGCAGCTT CAGGAATCCT ACGGCCCCTG AATATTTTGG CATCTTCAAC CTACCGCAAC TGTGT--CAA GAATGCCTCT CTTATTTCTG CATTGTCCAC
MRPL35P3 ATAGCTGCCT CTGCCTTTGC CGGTGCAGTG AGAGCAGCTT CAGGAATCTT ATGGCCTCTG AATATTTTGG CATCTTCAGC CTACCAAAAC TGTGT--CAA AAATGCCTCT CTTATTTCTG CATTGTCCAC
MRPL35P2 ATGGCTGCTT TTGCCTTTGC TGGTGCAGTG AGAGCAGCTT CAGGAATCCG ATGGCTCTTG AATATTTTGG CATCTTCAGC ATACAGAAAC TGTGT--CAA GAATGCCTCT CTTATTTCTG CATTGTCCAC
MRPL35P1 ATGGCTGCCA CTGCCTTTGC CAGTGCAGTG AGAGCAGCTT CAGGAATCTT ATAGCCCCTG AATATTTTGG CATCTTCAGC CTACCAAAAC TGTGTGTCAA GAATGCCTCT CTTATTTCTG CATTGTCCAC
MRPL35P4 ATGGCTGCCT CTGCCTTTGC TGGTGCGATG AGAGCAGCTT CAGGAATC-T ATGGCTCCTG AATATTTTTG CATCTCCAGC CCACCGAAAC TGTGC--CAG GAATGCCTCT CTTATTTCTG CATTGTCTAC
Consensus ATgGCTGCct cTGCCTTTGC tgGTGCagTG AGAGCAGCTT CAGGAATC.t AtgGCcccTG AATATTTTgG CATCTtCAgC ctACcgaAAC TGTGt..CAa gAATGCCTCT CTTATTTCTG CATTGTCcAC
131 260
MRPL35 TGGACGTTTT AGTCATATTC AGACACCAGT TGTTTCCTCC ACTCCCAGAC TTA-CCACAT CTGAGAGAAA CCTGACATGT GGGCATACCT CAGTGATCCT TAATAGAATG GCCCCCGTGC TTCCAAGTGT
MRPL35P3 TGGACGTTTT AGTCATATTC AGACACCAGT TGTTTCCTCC ACTCCCAGAC TTA-CCACAT CTGAGAGAAA CCTGACATGT GGGCATACTT CAGCGATCCT TAATAGAGTG GCCCTCTTGC TTCCAAGTGT
MRPL35P2 TGGACGTTTC AGTCATATTT AGACACCAGT TGTTTCCTCC ACTTCCAGAC TTAACCACAT CTGAGAGAAA CCTGACATGT GGGCATACTT CAGCGATCCT TAATAGAGTG TCCCCCTTGC TTCCGAGTGT
MRPL35P1 TGGACGTTTT AGTCATATTC AGACACCAGT TGTTTCCTCT GCTCCCAGAC TTA-CCACAT CTGTCAGAAA CCTGACATGT GGGCATCCTG CGGTAATCTT TAATAGAGTG GCCCCCTTGC TTCCAAGTGT
MRPL35P4 TGGACGTTTT AGTCATATTC AGACACCATT TGTTTCCTCC ACTCCCAGGC TGA-TCACAT CTGTCAGAAA CCTGACATGT GGGCATACTG CAGTGATCCC CAACAGAGTG GCCCCCTTGC TTCCAAGTGT
Consensus TGGACGTTTt AGTCATATTc AGACACCAgT TGTTTCCTCc aCTcCCAGaC TtA.cCACAT CTGagAGAAA CCTGACATGT GGGCATaCtt CaGtgATCct tAAtAGAgTG gCCCcCtTGC TTCCaAGTGT
261 373
MRPL35 CCTGAAGCTG CCAGTCAGAT CTCTAACATA CTTCAGTGCA AGAAAAGGCA AGAGAAAGAC CGTGAAAGCT GTCATCGATA GGTTTCTTCG ACTTCATTGT GGCCTT-GGG TGA
MRPL35P3 CTTGAAGCTG CCAGCCAGAT CTCTAACATA CGTCAGTACA GGAAAAGGCA AGAGAAGGAT TGTGAAAGCT GTCATCTATA GGTTTCTTCG ACTTCATTGT GGCCTTTGGA TGA
MRPL35P2 CCTGAAGCTG CCAGTCAGAT CTCTAACATA CTTCAGTACA TGAAAAGACA AGAGAAAGAC TGTGAAAGCT GTCATCTACA GGTTTCTTCG ACTTCATTGT GGCCTTTGGG TGA
MRPL35P1 CCTGAAGCTG CCAGTCAGAT CTCTAACATT CATTTGTACA CAAAAAGGCA AGAGAAAGAC TGTGAAAGCT GTCATCTATA GGTTTCTTTG ACTTCATTCT GGCCTTTGGT TGA
MRPL35P4 CCTGAAGCTG CCAGTCAGAA CTGTAATATA CGTCAGTACA CAAAAAGGCA AGAGAACAAC TGTGAAAGCT GTTATCTATA GGTTTTTTCG ACTTCATTCT GGCCTTTGGG TGA
Consensus CcTGAAGCTG CCAGtCAGAt CTcTAAcATa C.TcaGTaCA .gAAAAGgCA AGAGAAagAc tGTGAAAGCT GTcATCtAtA GGTTTcTTcG ACTTCATTgT GGCCTTtGGg TGA