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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 389 Check: 0 ..
Name: MRPL51 Len: 389 Check: 9185 Weight: 0.75
Name: MRPL51P2 Len: 389 Check: 4050 Weight: 0.75
Name: MRPL51P1 Len: 389 Check: 3664 Weight: 1.49
Name: Consensus Len: 389 Check: 3999 Weight: 0.00
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1 130
MRPL51 ATGGCAGGGA ACCTCTTATC CGGGGCAGGT AGGCGCCTGT GGGACTGGGT GCCTCTGGCG TGCAGAAGCT TCTCTCTTGG TGTGCCTAGA TTGATCGGTA TAAGGCTCAC TCTCCCGCCC CCCAAAGTGG
MRPL51P2 ATGGCAGGGA GCCTCTTATG TAGGGCAGGT AGGCGCCTGT GGGACTAGGT G----TGGCA TGCAGAAGCT TCTTTCTTGG TATTCCTAGA TTGATTGGTA TAAGGCTC-- ----CTACCC CCCAAAGTAG
MRPL51P1 AAGGTGG
Consensus atggcaggga .cctcttat. ..gggcaggt aggcgcctgt gggact.ggt g....tggc. tgcagaagct tct.tcttgg t.t.cctaga ttgat.ggta taaggctc.. ....c..ccc cccAAaGTgG
131 260
MRPL51 TTGATCGTTG G-AACGAGAA GAGGGCCATG TTCGGAGTGT ATGACAACAT CGGGATCCTG GGAAACTTTG AAAAGCACCC CAAAGAACTG ATCAGGGGGC CCATACGGCT TCGAGGTTGG AAAGGGAATG
MRPL51P2 TTGATCCTTG G-AACGAAAG GATGGCCATG TTCAGAGTGT ATGACAACAT CAGGATCCTG GGAAACTTTG AAAAGCACCC CAAA-AGCTG ATCAGGGACC CCATATGGCT TCGAGATTGG AAGGGGAATG
MRPL51P1 TTAATCATTG GGAATAAAAA GAGGGTCATC TTCAAAGTGT ATGACAGCAC TGGGATCCTG GGGGACTTTG AAA-GCCCAC CAAAAAATTT CTTCGAATTC CCAAATGGTT TCAAGGATAG AACAGGAATG
Consensus TTgATC.TTG G.AAcgAaAa GAgGGcCATg TTCagAGTGT ATGACAaCAt cgGGATCCTG GGaaACTTTG AAAaGCaCcC CAAA.AacTg aTcaGgg..C CCAtAtGGcT TCgAGgtTgG AA.gGGAATG
261 389
MRPL51 AATTGCAACG TTGTATCCGA AAGAGGAAAA -TGGTTGGAA GTAGAATGTT CGCTGATGAC CTGCACAACC TTAATAAACG CATCCGCTAT CTCTACAAAC ACTTTAACCG ACATGGGAAG TTTCGATAG
MRPL51P2 AATTGCAACG CTGTATGCTA AAGAAGAAAA -TGGTTGGAA ACAGAATGTT TGCTGATGAG CTGCACAACC TCAATAAACG CATCAGCTGT CTCTACAAAC ACTTTAACTG ACATGGGAAA TATCGATAG
MRPL51P1 TATTGTTTCA TTGCATCTGG AAGAAGAAAA ATGGATGGAC ATCAGCTGTT CTTTGGTGAC CA-CACAGCC TTAACAATTA CATCGGCAGT CTTTATAAAC AGTTTAACTA ACATAAGACT CAT-GGTAG
Consensus aATTGcaaCg tTGtATccga AAGAaGAAAA .TGGtTGGAa atagaaTGTT cgcTGaTGAc CtgCACAaCC TtAAtAAacg CATC.GCtgT CTcTAcAAAC AcTTTAACtg ACATggGAa. taTcGaTAG