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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 358 Check: 0 ..
Name: MRPL53 Len: 358 Check: 1333 Weight: 1.00
Name: MRPL53P1 Len: 358 Check: 5272 Weight: 1.00
Name: Consensus Len: 358 Check: 2075 Weight: 0.00
//
1 130
MRPL53 ATGGCAGCTG CCTTGGCTCG GCTTGGTCTG CGGCCTGTCA AACAGGTTCG GGTTCAGTTC TGTCCCTTCG AGAAAAACGT GGAATCGACG AGGACCTTCC TGCAGACGGT GAGCAGTGAG AAGGTCCGCT
MRPL53P1 ATGGCAGCCA CCTTGGTTAG GCTTGGGCTC TTGTCTGTCA AGCAGGTTCA GGTTCAATTC TACCCCTTTG AGAA----GT AGAGATGATG AGGACCTTCC TCTAGATGAT GAGTAATGAG AAGGTCCACT
Consensus ATGGCAGCca CCTTGGcTaG GCTTGGgCTc cgGcCTGTCA AaCAGGTTCa GGTTCAaTTC TacCCCTTcG AGAA....GT aGAaacGAcG AGGACCTTCC TccAGAcGaT GAGcAaTGAG AAGGTCCaCT
131 260
MRPL53 CCACTAATCT CAACTGCTCA GTGATTGCGG ACGTGAGG-- ---------C ATGACGGCTC CGAGCCCTGC GTGGACGTGC TGTTCGGAGA CG-------G GCATCGCCTG ATTATGCGCG GCGCTCATCT
MRPL53P1 CCACCAATCT CAACTGCTCA GCTATTGTGG ACATGAGGTG GACATGCAGC ATAATGACTT CGAGCCCTGT GTGGACATGC TGTTCAGAGA TGCTGTGTGG TCATCGCCTC ATTATGTGCT GCACCCATCT
Consensus CCACcAATCT CAACTGCTCA GcgATTGcGG ACaTGAGG.. .........C ATaAcGaCTc CGAGCCCTGc GTGGACaTGC TGTTCaGAGA cG.......G gCATCGCCTc ATTATGcGCg GCaCcCATCT
261 358
MRPL53 CACCGCTCTG GAAATGCTCA CCGCCTTCGC CTCCCACATC CGGGCCAGGG ACGCGGCGGG CAGCGGGGAC AAGCCGGGCG CTGATACTGG TCGCTGA
MRPL53P1 CACCACTCTG GAAATGCTCA CTGTCTTTGC CTCCCACATT GAGGCCAGAG ATGTGGCAAG GAGCCAAGAA TGTGCTGGTA CTGGACAATG ACAGTGCC
Consensus CACCaCTCTG GAAATGCTCA CcGcCTTcGC CTCCCACATc caGGCCAGaG AcGcGGCaaG cAGCcaaGAa aagcCgGGca CTGaaaaagG aCacTGa.