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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 807 Check: 0 ..
Name: MRPL9 Len: 807 Check: 2556 Weight: 1.00
Name: MRPL9P1 Len: 807 Check: 8310 Weight: 1.00
Name: Consensus Len: 807 Check: 6726 Weight: 0.00
//
1 130
MRPL9 ATGGCGGCGC CCGTTGTCAC GGCCCCGGGC AGAGCTCTGC TGCGGGCGGG CGCTGGACGG CTGCTTCGGG GAGGCGTCCA GGAGCTACTG CGGCCGCGAC ATGAAGGGAA CGCCCCTGAC CTGGCCTGCA
MRPL9P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
131 260
MRPL9 ACTTCAGCCT TTCTCAAAAT CGGGGCACGG TCATCGTGGA GCGCTGGTGG AAGGTACCGC TGGCCGGGGA GGGCCGGAAG CCGCGCCTGC ACCGGCGACA TCGCGTCTAT AAGCTGGTGG AGGACACGAA
MRPL9P1 TGG AAGGTACCAC TGGCCAGGGA GGGCCAGAAG CTGCGTCTGC ACCAGCGACA CTACATCGAC AAGCTGGTGG AGGACACGGA
Consensus .......... .......... .......... .......... .......TGG AAGGTACCaC TGGCCaGGGA GGGCCaGAAG CcGCGcCTGC ACCaGCGACA ccaCaTCgAc AAGCTGGTGG AGGACACGaA
261 390
MRPL9 GCATCGGCCC AAAGAAAACC TGGAGCTCAT CCTGACGCAG TCGGTGGAGA ATGTTGGAGT CCGGGGTGAC CTGGTCTCAG TGAAGAAATC TTTAGGCCGG AATCGACTCC TTCCTCAGGG ACTGGCTGTA
MRPL9P1 GCACTGGCCC AAAGAAAATC TGGAGATCAT CTTCACACAG TCTGTGGAGA CACTTGGAGT CTGGGGTGAC CTGATCTCAG TAAAGAAATC TGTGGATCGG AATCAACTCC TTTCTCAGAG ACTGGCTGCA
Consensus GCAccGGCCC AAAGAAAAcC TGGAGaTCAT CcTcACaCAG TCgGTGGAGA aacTTGGAGT CcGGGGTGAC CTGaTCTCAG TaAAGAAATC TgTaGacCGG AATCaACTCC TTcCTCAGaG ACTGGCTGcA
391 520
MRPL9 TATGCATCCC CTGAAAACAA GAAGCTGTTT GAAGAGGAGA AATTGCTGAG ACAAGAAGGA AAATTAGAGA AGATCCAGAC CAAGGCAGGT GAGGCGACAG TGAAATTTCT AAAAAGCTGT CGCCTGGAGG
MRPL9P1 TATGCATCAC CTGAAAACAA GAAGCTGTTT GAAGAGGAGA AATTGCTGAG ACCAGGAGGA AAGTTACAGA AGATCCAGAC CAAGGCAGGT GAGGCAACAG TGACATTTCT GAAAAGCTGT CACCTGGAGG
Consensus TATGCATCaC CTGAAAACAA GAAGCTGTTT GAAGAGGAGA AATTGCTGAG ACaAGaAGGA AAaTTAcAGA AGATCCAGAC CAAGGCAGGT GAGGCaACAG TGAaATTTCT aAAAAGCTGT CaCCTGGAGG
521 650
MRPL9 TAGGGATGAA GAACAATGTC AAATGGGAGC TGAACCCTGA AATAGTTGCC CGCCACTTCT TTAAGAATCT TGGTGTTGTG GTTGCCCCAC ATACATTAAA GTTACCAGCA GAGCCTATCA CACGGTGGGG
MRPL9P1 TAGGGATGAA GAACAGTGTC AAACGGGAGC TGAACCCTGA AACAGTTGCC TGCCACTTCT TCAAGAATCT TGGTGGTGTG GTCACCCC-C ATATAATAAA ATTACCGGAA GAGCCCCTCA CTCGGTGGGG
Consensus TAGGGATGAA GAACAaTGTC AAAcGGGAGC TGAACCCTGA AAcAGTTGCC cGCCACTTCT TcAAGAATCT TGGTGgTGTG GTcaCCCC.C ATAcAaTAAA aTTACCaGaA GAGCCcaTCA CaCGGTGGGG
651 780
MRPL9 CGAGTATTGG TGTGAGGTGA CGGTAAATGG GCTTGATACT GTGAGAGTGC CTATGTCTGT CGTGAACTTT GAGAAGCCCA AGACCAAAAG ATATAAGTAC TGGTTAGCCC AGCAAGCTGC CAAGGCTATG
MRPL9P1 CAAGTACTGT TGTGAGGTGA CGGTAAATGG GCTTGGTACT GTGAGGGTGC CTATGTCTCT GGTAAACTTT GAGAGGCCCA AAATCAAAAG ATAGAAGTAC TGGTTAGCCC AGCAAGCTGC CAAGGGCATG
Consensus CaAGTAcTGg TGTGAGGTGA CGGTAAATGG GCTTGaTACT GTGAGaGTGC CTATGTCTcT cGTaAACTTT GAGAaGCCCA AaAcCAAAAG ATAgAAGTAC TGGTTAGCCC AGCAAGCTGC CAAGGccATG
781 807
MRPL9 GCCCCCACCA GCCCCCAGA- --TCTAA
MRPL9P1 GCCCC-ACCA GCCTCTAGAG GATCTAA
Consensus GCCCC.ACCA GCCcCcAGA. ..TCTAA