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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 613 Check: 0 ..
Name: MRPS10 Len: 613 Check: 4348 Weight: 0.77
Name: MRPS10P5 Len: 613 Check: 3871 Weight: 0.77
Name: MRPS10P2 Len: 613 Check: 973 Weight: 0.70
Name: MRPS10P4 Len: 613 Check: 973 Weight: 0.70
Name: MRPS10P3 Len: 613 Check: 3625 Weight: 0.77
Name: MRPS10P1 Len: 613 Check: 5325 Weight: 2.29
Name: Consensus Len: 613 Check: 1731 Weight: 0.00
//
1 130
MRPS10 ATGGCGGCGC GGACAGCGTT CGGTGCTGTG TGCCGGCGCC TCTGGCAGGG ATTGGGGAAT TTTTCTGTAA ACACTTCTAA GGGCAATACA GCCAAAAATG GTGGCTTGCT TCTCAGTACC AATATGAAGT
MRPS10P5 GTGGCGGCGC GGACGGCGTT TGGGGCCGTG TGCCGGCGCC TCTGGCAGGG ATTGGGGAAT TTTTCTGTAA ACAGTTCTAA GGGCAATATA GCCAAAAATG GTGGCTTTCT TCTCAGTACC AATATGAAGT
MRPS10P2
MRPS10P4
MRPS10P3
MRPS10P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
131 260
MRPS10 GGGTACAGTT TTCAAACCTA CACGTTGATG TTCCAAAGGA TTTGACCAAA CCTGTGGTAA CAATCTCTGA TGAACCAGAC ATATTATATA AGCGCCTCTC GGTTTTGGTG AAAGGTCACG ATAAGGCTGT
MRPS10P5 GGGTACAGTT TTCAAACCTA CACGTTGATG TTCCAAAGGA TTTCACCAAA CCTGTGATAA CAATCTCTGA TGAACCAGAC ACATTATATA AGC------- ---------- ------CACG GTAAGGCTGT
MRPS10P2 CCTGTGATAA GCATTTTTGA TGAACCAAAC GAATGATATA AGTGCCTGTT CATTTTAACA AAAGGCCATG ACAGGGTTTT
MRPS10P4 CCTGTGATAA GCATTTTTGA TGAACCAAAC GAATGATATA AGTGCCTGTT CATTTTAACA AAAGGCCATG ACAGGGTTTT
MRPS10P3 CCTGTGATAA GCATTTTTGA TGAACCAAAC GAATGATATA AGTGCCTGTT CATTTTAACA AAAGGCCATG ACAGGGTTTT
MRPS10P1
Consensus .......... .......... .......... .......... .......... cctgtg.taa ..at.t.tga tgaacca.ac ..at.atata ag........ .......... ......ca.g ..a.gg.t.t
261 390
MRPS10 ATTGGACAGT TATGAATATT TTGCTGTGCT TGCTGCTAAA GAACTTGGTA TCTCTATTAA AGTACATGAA CCTCCAAGGA AAATAGAGCG ATTTACTCTT CTCCAATCAG TGCATATTTA CAAGAAGCAC
MRPS10P5 ATTGGACAGT TATGAATATT TTGCTGTGCT TGATGCTAAA GAACTTGGTA TCTCTATTAA AGTACACGAA CCTCCAAGGA AAATAGAGCG ATTTACTCTT CTCATATCAG TGCATATTTA TAAGAAGCAC
MRPS10P2 CTTGGACAGT TATGCATATT TGACAGCACT TGCAGCTACA GTTTCT---- TTTCTATTTA ATTACATGAG CTACCAAGGA ATATAGAGCC ATTTACTCTT CTAAAATCAG TGTACCTTTT CAAAAAATAC
MRPS10P4 CTTGGACAGT TATGCATATT TGACAGCACT TGCAGCTACA GTTTCT---- TTTCTATTTA ATTACATGAG CTACCAAGGA ATATAGAGCC ATTTACTCTT CTAAAATCAG TGTACCTTTT CAAAAAATAC
MRPS10P3 CTTGGACAGT TATGCATATT TGACAGCACT TGCAGCTACA GTTTCT---- TTTCTATTTA ATTACATGAG CTACCAAGGA ATATAGAGCC ATTTACTCTT CTAAAATCAG TGTACCTTTT CAAAAAATAC
MRPS10P1 TAATTT CAGACATGAA CCTCCAAGGA AAATAGAGCG ATTTACTCTT CTCCAATCAG TGCATATTTA CAAGAAGCAC
Consensus .ttggacagt tatg.atatt t..c.g..ct tg..gcta.a g....t.... t.tcTAtTta a.tACAtGAa CctCCAAGGA AaATAGAGCg ATTTACTCTT CTccaATCAG TGcAtaTTTa cAAgAAgcAC
391 520
MRPS10 AGAGTTCAGT ATGAAATGAG AACACTTTAC AGATGTTTAG AGTTA-GAAC ATCTAACTGG AAGCACAGCA GATGTCTACT TGGAATATAT TCAGCGAAAC TTACCTGAAG GGGTTGCCAT GGAAGTAACA
MRPS10P5 GGAGTTCAGT ATGAAATGAG AACACTTTAC AGATGTTTAG AGTTA-GAAC ATCTAACTGG AAGCACAGCA GATGTCTACG TGGAATATAT TCAGCGAAAC TTACCTGAAA GGGTTGCCAT GGAAGTAACA
MRPS10P2 AATGTTCAAT ATGAAATAAG GACACTCTAC AGATGTTTAG AATTG-GAAT ATTTGACTGA AAGTTCAGCA TATGT----G TGG------- -----GAAAT TGACCTGAAG AAGTTGCCAT GGAAGTTACT
MRPS10P4 AATGTTCAAT ATGAAATAAG GACACTCTAC AGATGTTTAG AATTG-GAAT ATTTGACTGA AAGTTCAGCA TATGT----G TGG------- -----GAAAT TGACCTGAAG AAGTTGCCAT GGAAGTTACT
MRPS10P3 AATGTTCAAT ATGAAATAAG GACACTCTAC AGATGTTTAG AATTG-GAAT ATTTGACTGA AAGTTCAGCA TATGT----G TGG------- -----GAAAT TGACCTGAAG AAGTTGCCAT GGAAGTTACT
MRPS10P1 AGAGTTCAGT ATGAAATGAG AACACTTTAC AGATGTTTAG AGGTGAGTGT ATTTG
Consensus agaGTTCAgT ATGAAATgAG aACACTtTAC AGATGTTTAG AgtTg.Gaat ATtTgactg. aag..cagca .atgt..... tgg....... .....gaaa. t.acctgaa. ..gttgccat ggaagt.ac.
521 613
MRPS10 AAGACACAAT TAGAACAGTT ACCAGAACAC ATCAAGGAGC CAATCTGGGA AACACTATCA GAAGAAAAAG -AAGAAAGC- ---AAGTCAT AA
MRPS10P5 AAGACACAAT TAGAACAGTT ACCAGAACAC ATCAAGGAGC CAATCTGGGA AACACTATCA GAAGAAAAAG -AAGAAAGC- ---AAGTCTT AA
MRPS10P2 AAAACA-GAT TAGAACATTT ACTGGGAGTC CTAAAGGAAC CAATTTGACA AACAGGACTA GAGGAGAAAG CAAGCAAGC- ---CAGCCAG AGA
MRPS10P4 AAAACA-GAT TAGAACATTT ACTGGGAGTC CTAAAGGAAC CAATTTGACA AACAGGACTA GAGGAGAAAG CAAGCAAGC- ---CAGCCAG AGA
MRPS10P3 AAAACA-GAT TAGAACATTT ACTGGGAGTC CTAAAGGAAC CAATTTGACA AACAGGACTA GAGGAGAAAG CAAGCAAGCA AGCCAGCCAG AGA
MRPS10P1
Consensus aa.aca..at tagaaca.tt ac..g.a..c .t.aagga.c caat.tg..a aaca..a..a ga.ga.aaag .aag.aagc. ....ag.c.. a..