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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 588 Check: 0 ..
Name: MRPS11 Len: 588 Check: 4180 Weight: 1.00
Name: MRPS11P1 Len: 588 Check: 2378 Weight: 1.00
Name: Consensus Len: 588 Check: 9197 Weight: 0.00
//
1 130
MRPS11 ATGCAGGCTG TGAGAAACGC GGGGTCGCGG TTCCTGCGGT CCTGGACTTG GCCCCAGACA GCCGGCAGGG TCGTGGCCAG AACGCCGGCC GGGACCATCT GCACAGGCGC TCGACAGCTC CAAGACGCTG
MRPS11P1 C CCAGAAGATC CAAGACATTG
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .........C cCaaaAGaTC CAAGACacTG
131 260
MRPS11 CGGCCAAGCA GAAAGTTGAA CAGAACGCGG ---CTCCCAG CCACACCAAG TTCAGCATTT ACCCTCCCAT TCCAGGAGAG GAGAGCTCTC TGAGGTGGGC AGGAAAGAAA TTTGAGGAGA TCCCAATTGC
MRPS11P1 AGGCCAAGCA GAACATTGAA GAGAAGATGG TAGCTCCCAG CTACACCAGC TTTAGCATTT ACCGTCCCAT TACAAAAGAA AAAAGCTCTC TGAGGTGGGC AGGAAAGAAA TTTGAGGAGA TCCCAACTGC
Consensus aGGCCAAGCA GAAaaTTGAA cAGAAcacGG ...CTCCCAG CcACACCAac TTcAGCATTT ACCcTCCCAT TaCAaaAGAa aAaAGCTCTC TGAGGTGGGC AGGAAAGAAA TTTGAGGAGA TCCCAAcTGC
261 390
MRPS11 ACACATTAAA GCATCCCACA ACAACACACA GATCCAGGTA GTCTCTGCTA GTAATGAGCC CCTTGCCTTT GCTTCCTGTG GCACAGAGGG ATTTCGGAAT GCCAAGAAGG GCACAGGCAT CGCAGCACAG
MRPS11P1 ACACATTAGA GCATCCTACA ACAACACACA GATCCAGGTA ATCTCTGCCA CTAATCAGCC CCTTGCCCAT ACTTCCTGTG GCACAGAGGA ATTTCTGAAT GCCAAGAAGG GCACAGGCAT TAATGCACAG
Consensus ACACATTAaA GCATCCcACA ACAACACACA GATCCAGGTA aTCTCTGCcA cTAATcAGCC CCTTGCCcaT aCTTCCTGTG GCACAGAGGa ATTTCgGAAT GCCAAGAAGG GCACAGGCAT caaaGCACAG
391 520
MRPS11 ACAGCAGGCA TAGCCGCAGC GGCGAGAGCT AAACAAAAGG GCGTGATCCA CATCCGAGTT GTGGTGAAAG GCCTGGGGCC AGGACGCTTG TCTGCCATGC ACGGACTGAT CATGGGCGGC CTGGAAGTGA
MRPS11P1 ACAACAGGCA TAGCAGCCGT GACAAAAGCT GCAGGAAAGG GTGTTACCCA CATCTGAGTT GTGGTGAAAG GCCAGGGGCC AGGACACCTG TCTGCCATCC AGGGACTGAC CATGGGGGGC CTGGAAGTGA
Consensus ACAaCAGGCA TAGCaGCaGc GaCaAaAGCT aaAcaAAAGG GcGTgAcCCA CATCcGAGTT GTGGTGAAAG GCCaGGGGCC AGGACaCcTG TCTGCCATcC AcGGACTGAc CATGGGcGGC CTGGAAGTGA
521 588
MRPS11 TCTCAATCAC AGACAACACC CCAATCCCAC ACAACGGCTG CCGCCCCAGG AAGGCTCGGA AGCTGTGA
MRPS11P1 TCTCAATCAC AG-CAACACC CCCATCCCAC ACAATGGCTC CTGCCCCAAG AAGGCTCCGA GGCTGTGA
Consensus TCTCAATCAC AG.CAACACC CCaATCCCAC ACAAcGGCTc CcGCCCCAaG AAGGCTCcGA aGCTGTGA