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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 797 Check: 0 ..
Name: MRPS15 Len: 797 Check: 7347 Weight: 0.75
Name: MRPS15P2 Len: 797 Check: 9665 Weight: 0.75
Name: MRPS15P1 Len: 797 Check: 6250 Weight: 1.49
Name: Consensus Len: 797 Check: 6756 Weight: 0.00
//
1 130
MRPS15 ATGCTGAGGG TCGCGTGGAG GACGCTGAGT TTGATTCGGA CCCGGGCAGT TACCCAGGTC CTAGTACCCG GGCTGCCGGG CGGTGGGAGC GCCAAGTTTC CTTTCAACCA GTGGGGCCTG CAGCCTCGAA
MRPS15P2 ATGCCAAGGG CTGTGTGAAA GGTGCTAAGT T--------- CCA---CTGA GACCCAAGCT CCAGTTTTTG AGAAGCCAAA AGGAGGGAGC ACCAGGCTTC CTTCCAACCA GTGGTGCTGG TATCCTCCAA
MRPS15P1 ATGCTGAGGG CCACATAGAG AGTGCCGAGT TCTATT-GGA CCCAGGCAGT GACCCAGACC CCAGTCCTTG GGCTGCTGGG CTGAGGGAAT GCCAGGCTTC CTTCCAACTG AAGGGGCCTG CA--------
Consensus ATGCtgAGGG ccgcgTggAg ggtGCtgAGT T..att.gga CCc.ggCaGt gACCCAggcc CcAGT.cttG gGctGCcggg cgGaGGGAgc gCCAgGcTTC CTTcCAACca gtGGgGCctG cA.cctc.aa
131 260
MRPS15 GTCTCCTCCT CCAGGCCGCG CGCGGATATG TCGTCCGGAA ACCAGCCCAG TCTAGGCTGG ATGATGACCC ACCTCCTTCT ACGCTGCTCA AAGACTACCA GAATGTCCCT GGAATTGAGA AGGTTGATGA
MRPS15P2 GTTTCTTCCT CCAGGCCACC TGTGGATATG CCATCCAGAA ACCAGTCCAG CCCAGCCAAG ATGATGACCT GTCCCCTTAT ACGCTGCTCA AAGACTACCA GAACTTTCCC AGGATTGAGA GGGTTGATGA
MRPS15P1 GTCTCCTCCT CCAGGCTGCA -GCAGATACA CCATCCAGAA ACCAGTCTGG CCTAGACAGG ACCATGACCT TCCCCTTTCC ATGCTGCTCA AAGACCACCA GACCATCCCT GGAATTGAGA AGGGCAATGA
Consensus GTcTCcTCCT CCAGGCcgC. .GcgGATAtg cCaTCCaGAA ACCAGtCcaG cCtAG.CagG AtgATGACCt .cCcCcTTct AcGCTGCTCA AAGACtACCA GAac.TcCCt gGaATTGAGA aGGttgATGA
261 390
MRPS15 TGTCGTGAAA AGACTCTTGT CTTTGGAAAT GGCCAACAAG AAGGAGATGC TAAAAATCAA GCAAGAACAG TTTATGAAGA AGATTGTTGC AAACCCAGAG GACACCAGAT CCCTGGAGGC TCGAATTATT
MRPS15P2 CATTGGGAAA AGACACTTGT CTTTGGAAAT GGCCAACCAG ---GAGAAGC CAAAAATTAA GCCAGAATAG TTGATAAAAA AGGACATGGC AAGCCCTGAG GACACCAGCT CCACAGAGGC TGGAATTATC
MRPS15P1 TACAGTGAAA AGATCCTTGT CTTTGGAAAT GACCAACCAA AAGGAGAAGC TAAATATCAA GTAAGAACAT CTGATGAACA AAGTCGTGGC AAACCCTAAG GACACCAGCT TCCTGGAGGC TCGAATTATT
Consensus tat.GtGAAA AGAc.CTTGT CTTTGGAAAT GgCCAACcAg aagGAGAaGC tAAAaATcAA GcaAGAAcAg tTgATgAA.A AggtcgTgGC AAaCCCtgAG GACACCAGcT cCctgGAGGC TcGAATTATt
391 520
MRPS15 GCCTTGTCTG TCAAGATCCG CAGTTATGAA GAACACTTGG AGAAACATCG AAAGGACAAA GCCCACAAAC GCTATCTGCT AATGAGCATT GACCAGAGGA AAAAGATGCT CAAAAACCTC CGTAACACCA
MRPS15P2 GACTTGAACA TCAAGGCCCA CAGTTATGAA AAACACATGC TGACATATTG AAAGGACAAA GCCCACAAAT GCTATCTGCT GATAAGCATC AACCAGAGGA AAAAGATGCT CAAAAACCTC CACAAAACCT
MRPS15P1 CCCTTGAC-- -CAAAGCCCA CAATTATGAA GAACACA-GC AGAAACACTG AAATAACAAA ACCCACAAAT ACTAT-TGGT GATGGGCACT GTCCAGAGGA AAAAGATGCT CAAAAACCTT CGTTAGACCA
Consensus gcCTTGac.. tCAAggcCCa CAgTTATGAA gAACACatGc aGAaAcAttG AAAggACAAA gCCCACAAAt gCTATcTGcT gATgaGCAtt gaCCAGAGGA AAAAGATGCT CAAAAACCTc CgtaA.ACCa
521 650
MRPS15 ACTATGATGT CTTTGAGAAG ATATGCTGGG GGCTGGGAAT TGAGTACACC TTCCCCCCTC TGTATTACCG AAGAGCCCAC ----CGCCGA TTCGTGACCA AGAAGGCTCT GTGCATTCGG GTT-TTCCAG
MRPS15P2 ATTATGACAA CTCTGGGAAG ACATGCAGGG AACTGGGGAC TGAAGACACC TTTCCCC-TC TGAATTACCA AACAGCCCAC TGACCGTCGC TTC-TGACTA AGAAGGCTCT GTGAATTCAG GTT-TTCCAG
MRPS15P1 A-TATGATGT CTCTGAGAAG ACACACTGGG GACTGAG--- ---------- ----CACATC TTTTTGATGG AGCAGCCCAT T----GCCAA GTCCTGACTG AGAAGACT-- GTGCGTTCTG GATGTTCCAA
Consensus A.TATGAtgt CTcTGaGAAG AcAtgCtGGG gaCTGgG.a. tga..acacc tt.cCcC.TC TgtaTtAccg AacAGCCCAc t...cGcCga tTC.TGACta AGAAGgCTct GTGcaTTC.G GtT.TTCCAg
651 780
MRPS15 GAGACTCAAA AGCTGAAGAA GCGAAGAAGA GCCTT----- -----AAAG- -GCTGCAGCA GCAGCCCAAA AACAAG-CAA -AGCGGAGGA ACCCAG--AC AGCCCTGCCA AAGCCATACC AAAGACACTC
MRPS15P2 AATGTGCAAA AGCTGAAGAA ACAAAAAAGG TCTTA----- -----GCTGC AGCAGCATCA GCAGTCAGAA AACAAAACAA -AACAAAAAC AATAAATTAT ATAAAAAATA AAGCAAAACA CAACAAAAAA
MRPS15P1 GAGACTCAAA AGCTGAAGAA GCAAAAACAG CCTTTAAAAG TTGCAGCAGC AGCAGCAGCA GCAGCGGCAG CTCAAAACAT GACCAGAGGA ATCCAG--AG AGCCCTGCCA AAGCCTGACC AGAAGTACTC
Consensus gAgactCAAA AGCTGAAGAA gCaAAaAagg .CtTt..... .....gcaGc aGCaGCAgCA GCAGcc..Aa aaCAAaaCAa .A.CagAgga A.ccAg..A. AgccctgccA AAGCca.ACc aaA.a.Actc
781 797
MRPS15 AAAGACAGCC AATAA
MRPS15P2 CAAGTAGGTA ATAAGT
MRPS15P1 AAAGAAAATA AACTGTT
Consensus aAAGaaagta Aa.agt.