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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 424 Check: 0 ..
Name: MRPS16 Len: 424 Check: 758 Weight: 1.00
Name: MRPS16P2 Len: 424 Check: 2113 Weight: 1.00
Name: MRPS16P1 Len: 424 Check: 8064 Weight: 1.00
Name: MRPS16P3 Len: 424 Check: 5170 Weight: 1.00
Name: Consensus Len: 424 Check: 9155 Weight: 0.00
//
1 130
MRPS16 ATGGTCCACC TCACTACTCT CCTCTG---- ----CAAGGC CTACCGTGGG GGCCACTTAA CCATCCGCCT TGCCCTGGGT GGCTGCACCA ATCGGCCGTT CTACCGCATT GTGGCTGCTC ACAACAAGTG
MRPS16P2 ATGGTCCACC TCACTACTCC CCTCTG---- ----CAAGGC CTATTACAGG GGCCACTTAA CGATCTGCCT TGCCCTGGGT GGCTGCACCA ACCAGCCCTT CTACCGCATT GTGGCTGCTC ACAG---GTG
MRPS16P1 ATGGTCCACC TCACTACTCT CCTCTG---- ----CAAGGC CTACCATGGG GGCCACTTAA CCATCTGCCT TGCCCTGGGC AGCTTTGCCA ACCGGCCCTT TTACACCATT GTGGCTGCTC ACAGCAAGTG
MRPS16P3 AATGTCCACC TCACTCTTCT CCTCTGTGTA TATCCTAGGC GTACCGTGGA TTCACCTTCA CCATCCTCTG AGCCCTGGGT GGCTGCACCA ACTGGCCCTT CCACGGCACT GTGTCTGCTC ACAG---GTG
Consensus AtgGTCCACC TCACTacTCt CCTCTG.... ....CaAGGC cTAccatgGg ggCcaCTTaA CcATCcgCct tGCCCTGGGt gGCTgcaCCA AccgGCCcTT ctACcgCAtT GTGgCTGCTC ACAg...GTG
131 260
MRPS16 TCCCAGGGAT GGCCGTTTCG TAGAGCAGCT GGGCTCCTAT GATCCATTGC CCAACAGTCA TGGAGAAAAA CTCGTTGCCC TCAACCTAGA CAGGATCCGT CATTGGATTG GCTGCGGGGC CCACCTCTCT
MRPS16P2 TCCCAGGGAT GGCCGTTTTG TAGAGCAGCT GGGCTCCTAT GATCCATTGC CCAACAGTCA TAGAGAAAAA CTTGCTGTCC TCAAACTGGA CTGGATCCAT CATTGGATTG GCTGTGGGGC CCACCTCTCT
MRPS16P1 TCCCAGGGAT GGTCTTTTGG TAGAGCAGCT GGGATCCTAT GATTCATTTC CCAACAGTCA TGGGGAAAAT CTCATTGCCC TCAACCTGGA CAGGATCCAG CATTGGATTG GCTGTGCTAC CCACCTCTTT
MRPS16P3 TCCCAGGAAC AGCCATTTCA TAGAGCAGTT GGGCTCCTAT GGTCCACTGC CCAACAGTCA TTAAGAGCAA CTCGTTCCCC TCAACCTGGA GAGGATCCGG CATTGGGTTG GCTGTGGGGC CC--------
Consensus TCCCAGGgAt gGcCgTTTcg TAGAGCAGcT GGGcTCCTAT GaTcCAtTgC CCAACAGTCA TggaGAaaAa CTcgtTgcCC TCAAcCTgGA caGGATCCag CATTGGaTTG GCTGtGgggC CCacctctct
261 390
MRPS16 -AAGCCTATG GAAAAGCTTC TGGGTCTTGC TGGCTTTTTC CCTCTGCATC CTATGATGAT CACAAATGCT GAGAGACTGC GAAGGAAACG GGCACGTGAA GTCCTGTTAG CTTCTCAGAA AACAGATGCA
MRPS16P2 -AAGCCTATG GAAAAGCTAG TGGGTCTTGC TGGGTTTTTC CCTGTGCATC CTATGATGAT CAGAAGTGCC GTGAGACTAT GAAGGAAATG GGCACCTGAA GTCCTCTTAG CTTCTCAGAA AACAGATGCA
MRPS16P1 TAAACCTATG GAAAAGCTTC TGGTTCTTGC TGGCTTTTTC CCTCTGCATC GTAAGATGAT CACAAATGCT GAGAGACTGT GAAGGAAATA GGCACATGAA GTCCTCTTAC TTTCTCAGAA AACAGATGCA
MRPS16P3 ---GCCTATG GAAAAGCTTC TCGGTCTTTC TGGCTTTTTT CCCCTGCATT CTATGCTGAC CACAACTGCT GAGTGACTGC AAAGAAAACA GGCACATGAA GTTCTCTTAG CTTTTCAGAA AACAGATACA
Consensus .aagCCTATG GAAAAGCTtc TgGgTCTTgC TGGcTTTTTc CCtcTGCATc cTAtGaTGAt CAcAAaTGCt GaGaGACTgc gAAGgAAAca GGCACaTGAA GTcCTcTTAg cTTcTCAGAA AACAGATgCA
391 424
MRPS16 GAAGCTACAG ATACAGAGGC TACAGAAACA TAA
MRPS16P2 GAGGCTACAG ATACAGAGGC TACAGGAACA CAA
MRPS16P1 GAGGCTACAG AAACATAAGT GAGCCGACTT CAGT
MRPS16P3 AAGGCTATAG GAACAGAAGT GAGTTCACTT CAGT
Consensus gAgGCTAcAG aaACAgAaGc gAcaggAaca cAa.