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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
 ! is anyone of IV
 $ is anyone of LM
 % is anyone of FY
 # is anyone of NDQEBZ

 MSF:    395    Check:   0         ..
 Name: MRPS17         Len:   395  Check: 3429  Weight:  0.38
 Name: MRPS17P1       Len:   395  Check: 2059  Weight:  0.38
 Name: MRPS17P2       Len:   395  Check: 2450  Weight:  0.38
 Name: MRPS17P9       Len:   395  Check: 2256  Weight:  0.57
 Name: MRPS17P4       Len:   395  Check: 5151  Weight:  0.62
 Name: MRPS17P7       Len:   395  Check: 5151  Weight:  0.62
 Name: MRPS17P8       Len:   395  Check: 5151  Weight:  0.62
 Name: MRPS17P3       Len:   395  Check: 6162  Weight:  1.22
 Name: MRPS17P6       Len:   395  Check: 6683  Weight:  2.49
 Name: MRPS17P5       Len:   395  Check: 4496  Weight:  2.71
 Name: Consensus      Len:   395  Check:  879  Weight:  0.00

//

            1                                                                                                                                          130
    MRPS17  ATGTCCGTAG TTCGCTCATC CGTCCATGCC AGATGGATTG TGGGGAAGGT GATTGGGACA AAAATGCAAA AGACTGCTAA AGTGAGAGTG ACCAGGCTTG TTCTGGATCC CTATTTATTA AAGTATTTTA
  MRPS17P1  ATGTCCGTAG TTCATTCATC CACCCATGCC AAGTGGATCG TGGGGAAGGT GATTGGGACA AAAATGCAAA AGACTGCTAA AGTGAGAGTG ACCAGGCTTG TTCTGGATCC CTATTTATTA AAGTATTACA
  MRPS17P2  ATGTCCGTAG TTCATTCATC CATCCATGCC AAGTGGATCG TGGGGAAGGT GATTGGGACA AAAATGCAAA AGACTGCTAA AGTGAGAGTG ACCAGGCTTG TTCTGGATCC CTATTTATTA AAGTATTACA
  MRPS17P9  ATGTCCATAG TTCGTTTATC CGTCCATGCC AAATGGATTA TGGGGAAGGT GACTGGGACA AAAATGCAAA AGACTGCTAA AGTGAGAGTG ATCAGGCTTG TTCTGGATCC CCATTTATTA AAGTATTATA
  MRPS17P4  ATGTCCGTCG TTCGTTCATC TGTCCATGCC AGATGGATCG TGGGGAAGGT GATTGGGACA AAAATACAAA AGACTGCTAA AGCGAGAGTG ACCGGGCTTG TTCTGGATCC CTATTTATTA AAGTATTATA
  MRPS17P7  ATGTCCGTCG TTCGTTCATC TGTCCATGCC AGATGGATCG TGGGGAAGGT GATTGGGACA AAAATACAAA AGACTGCTAA AGCGAGAGTG ACCGGGCTTG TTCTGGATCC CTATTTATTA AAGTATTATA
  MRPS17P8  ATGTCCGTCG TTCGTTCATC TGTCCATGCC AGATGGATCG TGGGGAAGGT GATTGGGACA AAAATACAAA AGACTGCTAA AGCGAGAGTG ACCGGGCTTG TTCTGGATCC CTATTTATTA AAGTATTATA
  MRPS17P3  ATGTCGATAG CACAATCATC TGATCATGCC AAACAAATAA CGGGGAAGGT GATTATGACA GCAATGCAAA AAGCTACTAA AGTGATAGTG ACCAGGCTTG TTCTGGATTC CTATTTAATA AGGTATTTTA
  MRPS17P6                                                                                                                                                
  MRPS17P5                                                                                                                                                
 Consensus  .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........

            131                                                                                                                                        260
    MRPS17  ATAAGCGGAA AACCTACTTT GCTCACGATG CCCTTCAGCA GTGCACAGTT GGGGATATTG TGCTTCTCAG AGCTTTACCT GTTCCACGAG CAAAGCATGT GAAACATGAA CTGGCTGAGA TCGTTTTCAA
  MRPS17P1  ATAAGCGGAA AACCTACTTT GCTCACGATG CCCTTCAGCA GTGCACAGTT GGTGATACTG TGCTTCTCAG AGCTTTACCT GTTCCGCGAA CAAAGCATGT GAAACATGAA CTGGCCGAGA TTGTTTTCAA
  MRPS17P2  ATAAGCGGAA AACCTACTTT GCTCACGATG CCCTTCAGCA GTGCACAGTT GGTGATACTG TGCTTCTCAG AGCTTTACCT GTTCCGCGAA CAAAGCATGT GAAACATGAA CTGGCCGAGA TTGTTTTCAA
  MRPS17P9  ATAAGCAAAA AACGTACTTT GCTCACAATG CCCTTCAGCA GTGCACAATT GGGGATATCG TGCTTCTCAA AGCTTTACCT GTTCCACGAA CAAAGCATGT GAAACATGAA CTGGCTGAGA TTGTTTTCAA
  MRPS17P4  ATAAGTGGAA AACCTCCTTT GTTCACGATG GCCTTCGGCA GTGCACAGCT GGGGATATCG TGCTTCTCAG AGCTTTACCT GTCCCATGAA CGAAGCATGT GAAACATGAA CAGGCCAAGA TCATTTTCAA
  MRPS17P7  ATAAGTGGAA AACCTCCTTT GTTCACGATG GCCTTCGGCA GTGCACAGCT GGGGATATCG TGCTTCTCAG AGCTTTACCT GTCCCATGAA CGAAGCATGT GAAACATGAA CAGGCCAAGA TCATTTTCAA
  MRPS17P8  ATAAGTGGAA AACCTCCTTT GTTCACGATG GCCTTCGGCA GTGCACAGCT GGGGATATCG TGCTTCTCAG AGCTTTACCT GTCCCATGAA CGAAGCATGT GAAACATGAA CAGGCCAAGA TCATTTTCAA
  MRPS17P3  ATAAGTGAAA GACCTGCTT- -CACTCAGTG TTTTTCAGCA GTGAACAGTT GAAGACACTG CACTTCTCAA ACCTTTATCT GTTTCATGAA TGAACAGTGT GAAACATGAA CTGGCTGAGA TAATTTTTAT
  MRPS17P6                                                 CACAGTT GAGAATTTTG TGCTTCTGAA AGCTTTAACT GTTCC----A CAAAGTCCAT GAAACATGAA CTGACTGAGA TAATTTTTCA
  MRPS17P5              ACCTACTTT GTTCACTTGA TACATCAGCA ATACATGGTT GAGGACATTT TGTTTCTCAA AAGTACTCCT ATTTTACAAA CTAAGATAAT GATACACAAT TTGCCTGAGA TAATTTTCAA
 Consensus  .......... .acct.cttt g.tcac.... ..c.tcagca .t.cAcaGtT GaggAtattg tgcTTCTcAa AgcTttacCT gTtcca..aA c.AAg...aT GAaACAtgAa ctG.CtgAGA TaaTTTTcaa

            261                                                                                                                                        390
    MRPS17  AGTTGGAAAA GTCATAGATC CAGTGACAGG AAAGCCCTGT GCTGGAACTA CCTACCTGGA GAGTCCGTTG AGTTCGGAAA CCACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAATATCT- -CTTCAGCAC
  MRPS17P1  AGTTGGAAAA ATCATAAATC CAGTGACAGG AAAGCCCTGT GCAGGAATTA CCTACCTAGA GAGTCCATTG AGTTTGGAAA CCACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAATATCT- -CTTCAGCAC
  MRPS17P2  AGTTGGAAAA ATCATAAATC CAGTGACAGG AAAGCCCTGT GCAGGAATTA CCTACCTAGA GAGTCCATTG AGTTTGGAAA CCACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAATATCT- -CTTCAGCAC
  MRPS17P9  AGTTGGAAAA CTCGTAGATC CTGTGACAGG AAAACCTTGT GCAGGAACTA CCTATCTGGA GAGTCCATTG AGTTCGGAAA CCACCCAGGT AAGCAAAAAT CTGAAAGAAC TCAATATCT- -CTTCAGCAC
  MRPS17P4  AGTTGGAAAA GTCATAGATC CAGTGACAGG AAAGCCCCGT GCAGGAACTA CCTACCTGGA GAGTCTGTTG AGTTTAGAAA CTACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAGTATCT- -CTTCGGCAC
  MRPS17P7  AGTTGGAAAA GTCATAGATC CAGTGACAGG AAAGCCCCGT GCAGGAACTA CCTACCTGGA GAGTCTGTTG AGTTTAGAAA CTACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAGTATCT- -CTTCGGCAC
  MRPS17P8  AGTTGGAAAA GTCATAGATC CAGTGACAGG AAAGCCCCGT GCAGGAACTA CCTACCTGGA GAGTCTGTTG AGTTTAGAAA CTACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAGTATCT- -CTTCGGCAC
  MRPS17P3  ATTTGGAAAA GTCATAGATC CAGTGACAGG AAAACTCTGT --AAGAATTA CCAACCTGGA GAGTTCAGTC AGTTTGGGAA CTATCCAGCT AAACAAAAAT CTAGAAGCAC TCAAAATCT- -TTTCAACAC
  MRPS17P6  AGTTAGAAGA GTCATA---- --GTGATAGG AAACCGTTGT TCAGGAACTA CCTACCTGGA GT-TCCAGTC AGTTTGGAAG CCACCCACAT ATCCAAAAAG CTAAAAGAAT TCAATATTTT TCTTCAGTAT
  MRPS17P5  AGTTGGAAAA GTCATAGATC CAGTAACAGA AAAAC-CTGG GCAGGAACTA TTACACT--- -TACCCACAA AA                                                               
 Consensus  AgTTgGAAaA gTCATAgatc caGTgAcAGg AAA.C.ctGt gcAgGAAcTA cctacCTgga gt.tcca.t. Agtttggaa. c.accca..t a..caaaaa. ct..aagaa. tcaatat.t. .cttcag.a.

            391  
    MRPS17  AGTGA
  MRPS17P1  AGTGG
  MRPS17P2  AGTGG
  MRPS17P9  AGTGA
  MRPS17P4  ACTGA
  MRPS17P7  ACTGA
  MRPS17P8  ACTGA
  MRPS17P3  TGAGG
  MRPS17P6  CATAA
  MRPS17P5       
 Consensus  ..t.a