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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 395 Check: 0 ..
Name: MRPS17 Len: 395 Check: 3429 Weight: 0.38
Name: MRPS17P1 Len: 395 Check: 2059 Weight: 0.38
Name: MRPS17P2 Len: 395 Check: 2450 Weight: 0.38
Name: MRPS17P9 Len: 395 Check: 2256 Weight: 0.57
Name: MRPS17P4 Len: 395 Check: 5151 Weight: 0.62
Name: MRPS17P7 Len: 395 Check: 5151 Weight: 0.62
Name: MRPS17P8 Len: 395 Check: 5151 Weight: 0.62
Name: MRPS17P3 Len: 395 Check: 6162 Weight: 1.22
Name: MRPS17P6 Len: 395 Check: 6683 Weight: 2.49
Name: MRPS17P5 Len: 395 Check: 4496 Weight: 2.71
Name: Consensus Len: 395 Check: 879 Weight: 0.00
//
1 130
MRPS17 ATGTCCGTAG TTCGCTCATC CGTCCATGCC AGATGGATTG TGGGGAAGGT GATTGGGACA AAAATGCAAA AGACTGCTAA AGTGAGAGTG ACCAGGCTTG TTCTGGATCC CTATTTATTA AAGTATTTTA
MRPS17P1 ATGTCCGTAG TTCATTCATC CACCCATGCC AAGTGGATCG TGGGGAAGGT GATTGGGACA AAAATGCAAA AGACTGCTAA AGTGAGAGTG ACCAGGCTTG TTCTGGATCC CTATTTATTA AAGTATTACA
MRPS17P2 ATGTCCGTAG TTCATTCATC CATCCATGCC AAGTGGATCG TGGGGAAGGT GATTGGGACA AAAATGCAAA AGACTGCTAA AGTGAGAGTG ACCAGGCTTG TTCTGGATCC CTATTTATTA AAGTATTACA
MRPS17P9 ATGTCCATAG TTCGTTTATC CGTCCATGCC AAATGGATTA TGGGGAAGGT GACTGGGACA AAAATGCAAA AGACTGCTAA AGTGAGAGTG ATCAGGCTTG TTCTGGATCC CCATTTATTA AAGTATTATA
MRPS17P4 ATGTCCGTCG TTCGTTCATC TGTCCATGCC AGATGGATCG TGGGGAAGGT GATTGGGACA AAAATACAAA AGACTGCTAA AGCGAGAGTG ACCGGGCTTG TTCTGGATCC CTATTTATTA AAGTATTATA
MRPS17P7 ATGTCCGTCG TTCGTTCATC TGTCCATGCC AGATGGATCG TGGGGAAGGT GATTGGGACA AAAATACAAA AGACTGCTAA AGCGAGAGTG ACCGGGCTTG TTCTGGATCC CTATTTATTA AAGTATTATA
MRPS17P8 ATGTCCGTCG TTCGTTCATC TGTCCATGCC AGATGGATCG TGGGGAAGGT GATTGGGACA AAAATACAAA AGACTGCTAA AGCGAGAGTG ACCGGGCTTG TTCTGGATCC CTATTTATTA AAGTATTATA
MRPS17P3 ATGTCGATAG CACAATCATC TGATCATGCC AAACAAATAA CGGGGAAGGT GATTATGACA GCAATGCAAA AAGCTACTAA AGTGATAGTG ACCAGGCTTG TTCTGGATTC CTATTTAATA AGGTATTTTA
MRPS17P6
MRPS17P5
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
131 260
MRPS17 ATAAGCGGAA AACCTACTTT GCTCACGATG CCCTTCAGCA GTGCACAGTT GGGGATATTG TGCTTCTCAG AGCTTTACCT GTTCCACGAG CAAAGCATGT GAAACATGAA CTGGCTGAGA TCGTTTTCAA
MRPS17P1 ATAAGCGGAA AACCTACTTT GCTCACGATG CCCTTCAGCA GTGCACAGTT GGTGATACTG TGCTTCTCAG AGCTTTACCT GTTCCGCGAA CAAAGCATGT GAAACATGAA CTGGCCGAGA TTGTTTTCAA
MRPS17P2 ATAAGCGGAA AACCTACTTT GCTCACGATG CCCTTCAGCA GTGCACAGTT GGTGATACTG TGCTTCTCAG AGCTTTACCT GTTCCGCGAA CAAAGCATGT GAAACATGAA CTGGCCGAGA TTGTTTTCAA
MRPS17P9 ATAAGCAAAA AACGTACTTT GCTCACAATG CCCTTCAGCA GTGCACAATT GGGGATATCG TGCTTCTCAA AGCTTTACCT GTTCCACGAA CAAAGCATGT GAAACATGAA CTGGCTGAGA TTGTTTTCAA
MRPS17P4 ATAAGTGGAA AACCTCCTTT GTTCACGATG GCCTTCGGCA GTGCACAGCT GGGGATATCG TGCTTCTCAG AGCTTTACCT GTCCCATGAA CGAAGCATGT GAAACATGAA CAGGCCAAGA TCATTTTCAA
MRPS17P7 ATAAGTGGAA AACCTCCTTT GTTCACGATG GCCTTCGGCA GTGCACAGCT GGGGATATCG TGCTTCTCAG AGCTTTACCT GTCCCATGAA CGAAGCATGT GAAACATGAA CAGGCCAAGA TCATTTTCAA
MRPS17P8 ATAAGTGGAA AACCTCCTTT GTTCACGATG GCCTTCGGCA GTGCACAGCT GGGGATATCG TGCTTCTCAG AGCTTTACCT GTCCCATGAA CGAAGCATGT GAAACATGAA CAGGCCAAGA TCATTTTCAA
MRPS17P3 ATAAGTGAAA GACCTGCTT- -CACTCAGTG TTTTTCAGCA GTGAACAGTT GAAGACACTG CACTTCTCAA ACCTTTATCT GTTTCATGAA TGAACAGTGT GAAACATGAA CTGGCTGAGA TAATTTTTAT
MRPS17P6 CACAGTT GAGAATTTTG TGCTTCTGAA AGCTTTAACT GTTCC----A CAAAGTCCAT GAAACATGAA CTGACTGAGA TAATTTTTCA
MRPS17P5 ACCTACTTT GTTCACTTGA TACATCAGCA ATACATGGTT GAGGACATTT TGTTTCTCAA AAGTACTCCT ATTTTACAAA CTAAGATAAT GATACACAAT TTGCCTGAGA TAATTTTCAA
Consensus .......... .acct.cttt g.tcac.... ..c.tcagca .t.cAcaGtT GaggAtattg tgcTTCTcAa AgcTttacCT gTtcca..aA c.AAg...aT GAaACAtgAa ctG.CtgAGA TaaTTTTcaa
261 390
MRPS17 AGTTGGAAAA GTCATAGATC CAGTGACAGG AAAGCCCTGT GCTGGAACTA CCTACCTGGA GAGTCCGTTG AGTTCGGAAA CCACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAATATCT- -CTTCAGCAC
MRPS17P1 AGTTGGAAAA ATCATAAATC CAGTGACAGG AAAGCCCTGT GCAGGAATTA CCTACCTAGA GAGTCCATTG AGTTTGGAAA CCACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAATATCT- -CTTCAGCAC
MRPS17P2 AGTTGGAAAA ATCATAAATC CAGTGACAGG AAAGCCCTGT GCAGGAATTA CCTACCTAGA GAGTCCATTG AGTTTGGAAA CCACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAATATCT- -CTTCAGCAC
MRPS17P9 AGTTGGAAAA CTCGTAGATC CTGTGACAGG AAAACCTTGT GCAGGAACTA CCTATCTGGA GAGTCCATTG AGTTCGGAAA CCACCCAGGT AAGCAAAAAT CTGAAAGAAC TCAATATCT- -CTTCAGCAC
MRPS17P4 AGTTGGAAAA GTCATAGATC CAGTGACAGG AAAGCCCCGT GCAGGAACTA CCTACCTGGA GAGTCTGTTG AGTTTAGAAA CTACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAGTATCT- -CTTCGGCAC
MRPS17P7 AGTTGGAAAA GTCATAGATC CAGTGACAGG AAAGCCCCGT GCAGGAACTA CCTACCTGGA GAGTCTGTTG AGTTTAGAAA CTACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAGTATCT- -CTTCGGCAC
MRPS17P8 AGTTGGAAAA GTCATAGATC CAGTGACAGG AAAGCCCCGT GCAGGAACTA CCTACCTGGA GAGTCTGTTG AGTTTAGAAA CTACCCAGCT AAGCAAAAAT CTGGAAGAAC TCAGTATCT- -CTTCGGCAC
MRPS17P3 ATTTGGAAAA GTCATAGATC CAGTGACAGG AAAACTCTGT --AAGAATTA CCAACCTGGA GAGTTCAGTC AGTTTGGGAA CTATCCAGCT AAACAAAAAT CTAGAAGCAC TCAAAATCT- -TTTCAACAC
MRPS17P6 AGTTAGAAGA GTCATA---- --GTGATAGG AAACCGTTGT TCAGGAACTA CCTACCTGGA GT-TCCAGTC AGTTTGGAAG CCACCCACAT ATCCAAAAAG CTAAAAGAAT TCAATATTTT TCTTCAGTAT
MRPS17P5 AGTTGGAAAA GTCATAGATC CAGTAACAGA AAAAC-CTGG GCAGGAACTA TTACACT--- -TACCCACAA AA
Consensus AgTTgGAAaA gTCATAgatc caGTgAcAGg AAA.C.ctGt gcAgGAAcTA cctacCTgga gt.tcca.t. Agtttggaa. c.accca..t a..caaaaa. ct..aagaa. tcaatat.t. .cttcag.a.
391
MRPS17 AGTGA
MRPS17P1 AGTGG
MRPS17P2 AGTGG
MRPS17P9 AGTGA
MRPS17P4 ACTGA
MRPS17P7 ACTGA
MRPS17P8 ACTGA
MRPS17P3 TGAGG
MRPS17P6 CATAA
MRPS17P5
Consensus ..t.a