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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 592 Check: 0 ..
Name: MRPS18A Len: 592 Check: 6617 Weight: 1.00
Name: MRPS18AP1 Len: 592 Check: 475 Weight: 1.00
Name: Consensus Len: 592 Check: 149 Weight: 0.00
//
1 130
MRPS18A ATGGCGGCCC TCAAGGCTCT GGTGTCCGGC TGTGGGCGGC TTCTCCGTGG GCTACTAGCG GGCCCGGCAG CGACCAGCTG GTCTCGGCTT CCAGCTCGCG GGTTCAGGGA AGTGGTGGAG ACCCAAGAAG
MRPS18AP1 ATGGCGGCCT TTGAGGCTCT GGTGTCTGGC TGTGGGCAGC TTCCGTGTGG GCTCCTAGCA GGCCCAGCAG TGACCAGCTG GTCTCAGCTT CCAGCTCGTG GTTTCAGGGA AGTGGTGGAA ATCCAAGAAG
Consensus ATGGCGGCCc TcaAGGCTCT GGTGTCcGGC TGTGGGCaGC TTCcccGTGG GCTaCTAGCa GGCCCaGCAG cGACCAGCTG GTCTCaGCTT CCAGCTCGcG GgTTCAGGGA AGTGGTGGAa AcCCAAGAAG
131 260
MRPS18A GGAAGACAAC TATAATTGAA GGCCGTATCA CAGCGACTCC CAAGGAGAGT CCAAATCCTC CTAACCCCTC TGGCCAGTGC CCCATCTGCC GTTGGAACCT GAAGCACAAG TATAACTATG ACGATGTTCT
MRPS18AP1 GAAAGACAAC TATAATTGAA GGCCGTATCA CAGCGACTCC CAAGGAGAGT CCAAATCCTC CTAACCCCTC TGGCCAGTGC CCCATCTGCC ACTGGAACCT GAACCACAAG TAAAACTATG ATGATGTTTT
Consensus GaAAGACAAC TATAATTGAA GGCCGTATCA CAGCGACTCC CAAGGAGAGT CCAAATCCTC CTAACCCCTC TGGCCAGTGC CCCATCTGCC acTGGAACCT GAAcCACAAG TAaAACTATG AcGATGTTcT
261 390
MRPS18A GCTGCTTAGC CAGTTCATCC GGCCTCATGG AGGCATGCTG CCCCGAAAGA TCACAGGCCT ATGCCAGGAA GAACACCGCA AGATCGAGGA GTGTGTGAAG ATGGCCCACC GAGCAGGTCT ATTACCAAAT
MRPS18AP1 GCTGCTTAGC CAGTTCATCC AGCCCCATGG AGGCATGCTG CCCCGAAAGA TCACAGGCCT ATGACGGGAA GAGAACTGCA AGATTGAGGG GTGTGTGAAG ATGGCCTACC GAGCAGGTCT GTTACCAAAT
Consensus GCTGCTTAGC CAGTTCATCC aGCCcCATGG AGGCATGCTG CCCCGAAAGA TCACAGGCCT ATGaCaGGAA GAaaACcGCA AGATcGAGGa GTGTGTGAAG ATGGCCcACC GAGCAGGTCT aTTACCAAAT
391 520
MRPS18A CACAGGCCTC GGCTTCCTGA AGGAGTTGTT CCGAAGAGCA AACCCCAACT CAACCGGTAC CTGACGCGCT GGGCTCCTGG CTCCGTCAAG CCCATCTACA AAAAA-GGCC CCCGCTGGAA CAGGGTGCGC
MRPS18AP1 CACAGGCCTC AGCTTCCTGA AGGAGTTGTT CCAAAGGGCA AACCCCAATT CAACCAGTAC CTGACCCACT GGGGTCCCCG CACCCTCATG CCCATCTACA AAAAAAGGCC TCCCCTGGAA CAGGGCGTTC
Consensus CACAGGCCTC aGCTTCCTGA AGGAGTTGTT CCaAAGaGCA AACCCCAAcT CAACCaGTAC CTGACcCaCT GGGcTCCccG CaCCcTCAaG CCCATCTACA AAAAA.GGCC cCCcCTGGAA CAGGGcGcgC
521 592
MRPS18A ATGCCCGTGG GGTCACCCCT TCTGAGGGAC AATGTCTGCT ACTCAAGAAC ACCTTGGAAG CTGTATCACT GA
MRPS18AP1 ATGGCCTTGG GGTCAACCCT CCTGAGGGAC AATGTCTGCT ACTCAAGGAC ACCTTGGAAG CTGTATCACT CA
Consensus ATGcCCgTGG GGTCAaCCCT cCTGAGGGAC AATGTCTGCT ACTCAAGaAC ACCTTGGAAG CTGTATCACT cA