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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 778 Check: 0 ..
Name: MRPS18B Len: 778 Check: 2711 Weight: 0.75
Name: MRPS18BP2 Len: 778 Check: 4811 Weight: 0.75
Name: MRPS18BP1 Len: 778 Check: 5477 Weight: 1.49
Name: Consensus Len: 778 Check: 8557 Weight: 0.00
//
1 130
MRPS18B ATGGCGGCGT CTGTATTAAA CACCGTGCTG AGGCGGCTTC CTATGCTATC TCTCTTCCGA GGTTCTCACA GAGTTCAGGT TCCCCTCCAG ACTCTTTGCA CCAAAGCTCC CTCTGAGGAA GATTCTTTGT
MRPS18BP2 ATGGTGATGC CCATATTAAA CACC-TACTA AGGCAGCTTC CTATCCTTTC TCTCTTCTGA AGTACAAATG GAGTTCAGGT TCCCCTCCAG ACTCTTT-CA CCAAAGCTCC TTCTGAGAAA GATTCTTTGC
MRPS18BP1
Consensus atgg.g..g. c..tattaaa cacc.t.ct. aggc.gcttc ctat.ct.tc tctcttc.ga .gt.c..a.. gagttcaggt tcccctccag actcttt.ca ccaaagctcc .tctgag.aa gattctttg.
131 260
MRPS18B CCTCAGTTCC CATTTCTCCT TATAAGGATG AGCCCTGGAA ATATCTGGAA TCAGAAGAAT ACCAGGAGCG ATATGGTTCT CGCCCCGTCT GGGCTGACTA CCGCCGCAAC CACAAGGGTG GTGTACCCCC
MRPS18BP2 CCCCAGTTCC CATTTCACTA TATGAGAATG AACCCTGGAA ATATCTGGAA TCAGAAGAAT ACCAAGAACC ATAGGGTTCT CATCCCAACT GGGTGGACTA TTGCCACTAC TACAAGGGTG ATATACCCCC
MRPS18BP1
Consensus cc.cagttcc catttc.c.. tat.ag.atg a.ccctggaa atatctggaa tcagaagaat acca.ga.c. ata.ggttct c..ccc..ct ggg..gacta ..gcc.c.ac .acaagggtg .t.taccccc
261 390
MRPS18B ACAGCGGACT CGGAAGACAT GTATTCGTCG GAATAAAGTT GTTGGGAATC CCTGCCCCAT CTGTCGAGAT CACAAGTTGC ATGTTGACTT TAGGAACGTG AAGCTCTTGG AGCAATTTGT CTGCGCCCAC
MRPS18BP2 ACAGCAGACT CAAAAGACAT GTATGCATAG GAAAACAGTC GCTGGGAATC CCTGCCCCAT CTGCCAAGGT CACAAGTTGC ATGTTGACTT TAGGAATGTT AAGCTCTTGG AACAGTTTGT CAGTGCCCAC
MRPS18BP1
Consensus acagc.gact c..aagacat gtat.c.t.g gaa.a.agt. g.tgggaatc cctgccccat ctg.c.ag.t cacaagttgc atgttgactt taggaa.gt. aagctcttgg a.ca.tttgt c.g.gcccac
391 520
MRPS18B ACGGGTATCA TCTTCTATGC TCCATACACA GGAGTCTGTG TGAAGCAGCA CAAGCGGTTG ACCCAGGCCA TCCAGAAAGC CAGGGATCAT GGTCTCCTCA TTTACCACAT CCCCCAGGTT GAACCACGGG
MRPS18BP2 ACGGGTATTA TCTTCCACGC TCCATACACA GGAGTCTGTA TGAAGCAGCA CAAGATGTTG ACCCATGCCA TCCAGAAAGC CAGGGATCAT GGTCTCCTCA GTTACCACAT CTCCCAAGTT GAACCCCGGG
MRPS18BP1
Consensus acgggtat.a tcttc.a.gc tccatacaca ggagtctgt. tgaagcagca caag..gttg accca.gcca tccagaaagc cagggatcat ggtctcctca .ttaccacat c.ccca.gtt gaacc.cggg
521 650
MRPS18B ACCTTGACTT CAGTACCTCT CATGGGGCTG TGAGTGCTAC TCCGCCAGCC CCCACCCTGG TCTCAAGTGA CCCCTGGTAC CCATGGTACA ACTGGAAACA GCCACCGGAG AGAGAACTGT CTCGCCTTCG
MRPS18BP2 ACCTTGATTT TAGTGCCTCT CATGGAGCTA TGAGTACTTC TCTGCCAGTC CCCACCCTCG TCTCAGGTGA ACCCTGGTAC CTATGGTACA GCTGGAAACA GCCATCAGAG AAAGAACTGT CTCACCTTTG
MRPS18BP1 CAGGCGA CCTCTGGTAC CCATGGTACA ACTGAAAACA GCCACCAGAG AGAGAACTGT CTCACCTTCC
Consensus accttga.tt .agt.cctct catgg.gct. tgagt.ct.c tc.gccag.c cccaccct.g tctCAgGtGA cCcCTGGTAC CcATGGTACA aCTGgAAACA GCCAcCaGAG AgAGAACTGT CTCaCCTTcg
651 778
MRPS18B CCGGCTTTAC CAGGGTCATC TCCAAGAAGA GAGTGGCCCC C-CACCTGAG TCAATGCCCA AGATGCCCCC TAGAACACCA GCGGAAGCCT CCTCCACTGG GCAGACAGGC CCTCAGAGTG CTCTGTAG
MRPS18BP2 CCAGCTCTAT CAGGATTATC TCTAAGAAGA GAGTGGCCCC CGCACCTGAG TCAATGCCCA AGATGCTTCC CACAACACCA GTGGAAGCCT CCTTCACTGA AGAGACAGGC CCCTAGAGTG CTCTGGAG
MRPS18BP1 TCGGCTCTAT CAGGGTCATC TCTGATAAGA CAGTGGCCCT C--ACCTGAG TCAGTGCCCA AGGTGCCCCC CACAACACCA GCGGAGGCCT CCTCCACTGA GCAGTC-GGA CCCCAGAGTG CTCTGTAG
Consensus cCgGCTcTAt CAGGgTcATC TCtaAgAAGA gAGTGGCCCc C.cACCTGAG TCAaTGCCCA AGaTGCccCC cAcAACACCA GcGGAaGCCT CCTcCACTGa gcAGaCaGGc CCccAGAGTG CTCTGtAG