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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 279 Check: 0 ..
Name: MRPS21 Len: 279 Check: 5465 Weight: 0.60
Name: MRPS21P3 Len: 279 Check: 5608 Weight: 0.60
Name: MRPS21P6 Len: 279 Check: 8972 Weight: 0.72
Name: MRPS21P2 Len: 279 Check: 4649 Weight: 0.74
Name: MRPS21P1 Len: 279 Check: 4695 Weight: 0.77
Name: MRPS21P7 Len: 279 Check: 521 Weight: 0.67
Name: MRPS21P8 Len: 279 Check: 1624 Weight: 0.67
Name: MRPS21P5 Len: 279 Check: 9384 Weight: 1.24
Name: MRPS21P9 Len: 279 Check: 8933 Weight: 1.44
Name: MRPS21P4 Len: 279 Check: 9071 Weight: 2.56
Name: Consensus Len: 279 Check: 9722 Weight: 0.00
//
1 130
MRPS21 ATGGCAAAA CATCTGAAGT TCATCGCCAG GACTGTGATG GTACAGGAAG GGAACGTGGA AAGCGCATAC AGGACCCTAA ACAGAATCCT CACTATGGAT GGGCTCATTG AGGACATTAA GCATCGGCG-
MRPS21P3 ATGGCAAAA CATCTGAAGT TCATCACCAG GACTGTGATG GTATAGGAAG GGAACGTGGA AGGTGCATAG AGGACCCTAA ACAGAATCCT CACTACGGAT GGGCTCACTG AGGACATTAA GCTTCGGCG-
MRPS21P6 ATGGCCAGA CATCTGGAGT TCATCGCCAG GACTGTGATG GCACAGGAAG GGAATGTGGA AAGCGCACAC AGGACCCTAA ACAGAATCCT AACTATGGAT GGGCTCATTG AGGACATTAG GCGTCGGCG-
MRPS21P2 ATGGCAAAA CATCTGAAAT TCACCGCCAG GACTGAGATG GTACAGGAAG GAAACGTGGA AGGTGCATAC AGGACCCTAA ACAGAATCCT CACTGTGGAT GGGCTCCTTG AGGACATTAA ATGTCCATG-
MRPS21P1 ATGGCAAAA CATCTGAAGT TCATCGCCAG GACTGTGATG GTACAGGAAG GGAACATGGA AGGTGCATAC AGGACCCTAA GCAGAATCCT CACTACGGAT AGGCTGATTG AGGGCATTAA GCCTCAACG-
MRPS21P7 AGGGCAAAA CATCTGGAGT TCATTGCCAG GACTGTGATG TTACAGAAAA GGACCGTGAA AGGTGCGTGT GGGACCCAAC ACAGAATCGT GGCCATGAAT GGGCTCGCTG AGGACATTCG ACATCAGCG-
MRPS21P8 AGGGCAAAA CATCTGGAGT TCATTGCCAG GACTGTGATG TTACAGAAAA GGACCGTGAA AGGTGCGTGC GGGACCCAAC ACAGAATCGT GGCCATGAAT GGGCTCGCTG AGGACATTCG ACATCAGCG-
MRPS21P5 ATGGTAAAA CATCTGAAGT TCATTGCCAG GACTATGATG GTACAGGAAG GG-CCGTGGA GGG----TAC AGGACCCTCA AAGGAATCCT CACTGTAGAT GGACTCATTG AGGACATTAA GCATCGGGGA
MRPS21P9 ATGGATTTAA AACCTGAAGT TCATTGCCAG GAGTATGATG GCACAGGAAG GGAATGTGGA AGGCACATAC AGGACCCTAA AGAGAGTCCT CACCGTGGAT GAACTCATTA AGGACATTAA GCATTGGTA-
MRPS21P4 CTAA TTTTT-----
Consensus .a.gg.aaaa catctgaagt tcat.gccag gact.tgatg gtacaggaag gga.cgtgga agg..c.tac aggaccctaa a.agaatcct cac..tggat gg.ctcattg aggacatTaa gc.Tc.g.g.
131 260
MRPS21 ---------- -GTATTATGA GAAGCCATGC CGCCGGCGAC AGAGGGAAAG CTATGAAAGG TGCCGGCGGA TCTACAACAT GGAAATGGCT CGCAAGATCA --ACTTCTTG ATGCGAAAGA ATCGGGCAGA
MRPS21P3 ---------- -GTATTATGA GAAGCCATGC GGCCGGCGAC AGAGGGAAAG CTATGAAAAG TGCCGGCGGA TCTACAGTAT GGAAATGGCT CACAAGATCA --ACTTCTTG ATGCGAAAGA ATCAGGCAGA
MRPS21P6 ---------- -GTATTGTGA GAAGCCATGC CACCGGCTGC AGAGGGAAAG CTATGAGAGG TGCCGGCTGA TCTATAGCAC GGAAATGGCT CGCAATATCA --ACTTCTTG ATGTAAAAGA ATTGGGCAGA
MRPS21P2 ---------- -GTATAATGA AAAGCCATGC CGCCAGCGAC AGAGGAAAAG CTATAAAAGG TGCTGGCAGA TCTATAACAT GGAAATGGCT CGCAAGATCA --ACTTCTTG ATGCAAAAGA ACTGGGTAGA
MRPS21P1 ---------- -GTACTGTGA GAAGCCATGC CACCGGCGAC AGAGGGAAAG CTATGAAAGG TGATGGCGGA TCTACGGCAT GGAAATGGCT CGCAAGATCA --ACTA-TTG ATGCACAAGA ATTGGGCAGA
MRPS21P7 ---------- -GTGCCATGA GAAGCCATGC CACCAGCAAC AG-GGGAAAG CTACGGAACC TGCCGGCAGA TCTACAGCAT GGAGATGGCT CCAAAGATCA --ACCTCTTG GTGGAAAAGA ACTGGCTGGA
MRPS21P8 ---------- -GTGCCATGA GAAGCCATGC CACCAGCAAC AG-GGGAAAG CTACGGAACC TGCTGGCAGA TCTACAGCAT GGAGATGGCT CCAAGGATCA --ACCTCTTG GTGGAAAAGA ACTGTCTGGA
MRPS21P5 TACCATCAGG GGTACGATGA GAAGCCATGC CGCTGTTGAC AGCAGGAAAG CTATGAAACC TGCCGGCAGT CCTACAGCAA G-AAATGACT CGCAAGATCA --GATTCCTG ATGCAAAAGA ATTGGACAGA
MRPS21P9 ---------- -GTACTATGA GAAGCTATGC TGACAGTGAC AGCAGGAGAG TTCTGAAACC TGCCAGCAAA TCCACAAAAT GGAAATGGCT CGCAGGATCA CTTTTTTTTT TTTTTTTGAG ACAAAGTATC
MRPS21P4 ---------- -GTACTGTGA GAAGCCATGC CACCAGGAAC AAAGGGAAAT CTATGAAACC TGCTGGCAGA TCTACAACAT GGAAATGGCT AGCAAGATCA --ACTTCTTG ATGTAAAAGA ATCAGGCAGA
Consensus .......... .GTactaTGA GAAGCcATGC caccag.gAC AgagGGAaAg cTatGaAAcc TGCcgGCaga tCtAcAacAt GgAaATGgCT cgcAaGATCA ..actTctTg aTg.aaaaga At.gggcaga
261 279
MRPS21 TCCGTGGCAG GGCTGCTGA
MRPS21P3 TCCGTGGCGG GGCTGCTGA
MRPS21P6 TCTCTGGCAG GGCTGCTGA
MRPS21P2 TCCGTGGCAG GGCTGCTGA
MRPS21P1 TCTGTG-CAG GGCTGCTGA
MRPS21P7 TC---GGCGG AGCTGCTGA
MRPS21P8 TC---GGCGG GGCTGCTGA
MRPS21P5 CCTGCGTCAG GACTGCTGA
MRPS21P9 ACTCTATCTC CCAGGCTGG
MRPS21P4 ACCGAGGCAG GAATGCTGA
Consensus .C.g.ggCag g.ctGCTGa