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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 1083 Check: 0 ..
Name: MRPS22 Len: 1083 Check: 3606 Weight: 1.00
Name: MRPS22P1 Len: 1083 Check: 8635 Weight: 1.00
Name: Consensus Len: 1083 Check: 5766 Weight: 0.00
//
1 130
MRPS22 ATGGCGCCCC TCGGAACAAC TGTATTGCTG TGGAGCCTCT TGAGGAGTTC TCCGGGCGTG GAACGGGTCT GTTTCCGGGC TCGAATCCAG CCCTGGCACG GTGGCCTGCT CCAACCGCTA CCTTGCTCTT
MRPS22P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
131 260
MRPS22 TCGAGATGGG GCTGCCACGC CGCCGGTTCA GCTCCGAGGC CGCAGAATCT GGTAGCCCAG AGACCAAGAA ACCTACATTT ATGGATGAGG AAGTTCAAAG CATACTCACG AAAATGACAG GCTTGAACTT
MRPS22P1 TGAAC AAGTTGAAAG CGTACTAATC AGGATGACTG GTTTGAATTT
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .....TGAac AAGTTcAAAG CaTACTaAcc AaaATGACaG GcTTGAAcTT
261 390
MRPS22 GCAGAAGACT TTTAAGCCAG CTATACAAGA ACTGAAGCCA CCAACCTATA AGCTAATGAC TCAGGCACAG TTGGAAGAGG CTACAAGACA GGCAGTTGAG GCAGCTAAAG TACGATTAAA AATGCCACCA
MRPS22P1 ACAGTCGATT TTAAATCTAG CTGTTAAAGA ACTGAAACCA TGAATCCATA CGCCAATGAC GCAGGCATAG TTGGAAAAGG CTACAAAACA G--------- ---------- TACGT----- -AAGCCAT--
Consensus aCAGaaGAcT TTaAAgCcAG CTaTaaAAGA ACTGAAaCCA ccAAcCcATA aGCcAATGAC gCAGGCAcAG TTGGAAaAGG CTACAAaACA G......... .......... TACGa..... .AaGCCAc..
391 520
MRPS22 GTTCTGGAAG AGCGAGTACC AATAAATGAT GTGTTAGCTG AAGATAAGAT TTTGGAAGGA ACAGAAACAA CCAAATATGT GTTTACTGAT ATATCATATA GCATACCACA CCGGGAGCGT TTTATTGTCG
MRPS22P1 -------AAA AGAATAAAAC GTCTAAACAT GTGTATG--- ---------- TATACACACC CCCAACACAC ACACACAC-- ----ACCGTA AAA----AAA CCCACACACA CTGGGGATAT CTTGCTGTGA
Consensus .......AAa AGaaaaaAaC aacaAAacAT GTGTaaG... .......... TaTacAaaca aCaaAaACAa aCAaAcAc.. ....ACcGaa AaA....AaA cCaaaaCACA CcGGGaacaT cTTacTGTca
521 650
MRPS22 TCAGAGAACC AAGTGGCACA CTACGCAAAG CCTCTTGGGA AGAACGGGAC CGAATGATAC AAGTTTATTT CCCAAAAGAA GGTCGTAAAA TTTTGACACC AATAATTTTC AAGGAAGAAA ATCTTAGGAC
MRPS22P1 TCAGAGAACA AAGTGGCATG CAAC-CAAGA CCTCATAGGA AGAGGAGAAA AGGATGATAC ACATTTATTT CTAAATCGAG GATCCTAAAA CTTT-CCACT ATTGATATTC AAAGAGAAAA ATTATAAGAC
Consensus TCAGAGAACa AAGTGGCAca CaAC.CAAaa CCTCaTaGGA AGAacaGaAa aGaATGATAC AaaTTTATTT CcaAAaaGAa GaTCcTAAAA cTTT.aCACc AaTaATaTTC AAaGAaaAAA ATcaTAaGAC
651 780
MRPS22 TATGTATAGC CAGGACAGGC ATGTTGATGT CCTCAATCTC TGCTTTGCCC AGTTTGAGCC AGATTCCACA GAGTATATCA AGGTTCATCA CAAGACCTAT GAAGATATAG ATAAACGTGG AAAATATGAC
MRPS22P1 CGTGTACAGC CAG------- ------CTAT CCTCCA-CTC TGCATTGTTC TGTCTGAACC AGATTCTGCC GAGTATATCA AGCTCTATTG GCAAA
Consensus caTGTAcAGC CAG....... ......aTaT CCTCaA.CTC TGCaTTGccC aGTcTGAaCC AGATTCcaCa GAGTATATCA AGcTccATca caAaA..... .......... .......... ..........
781 910
MRPS22 CTTTTACGTT CAACAAGATA CTTTGGTGGA ATGGTGTGGT ATTTTGTAAA TAATAAAAAG ATTGATGGTT TGCTGATTGA CCAGATTCAG AGAGATTTAA TCGATGATGC AACCAACTTG GTCCAGCTGT
MRPS22P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
911 1040
MRPS22 ATCACGTGCT CCATCCAGAT GGCCAGTCGG CTCAAGGGGC CAAGGATCAG GCTGCTGAGG GAATAAATTT AATCAAGGTC TTTGCAAAAA CAGAAGCACA GAAGGGAGCC TATATAGAAC TAACACTGCA
MRPS22P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
1041 1083
MRPS22 GACTTATCAA GAAGCACTCA GTCGCCATTC TGCAGCTTCC TAA
MRPS22P1
Consensus .......... .......... .......... .......... ...