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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 591 Check: 0 ..
Name: MRPS23 Len: 591 Check: 3748 Weight: 1.00
Name: MRPS23P1 Len: 591 Check: 3441 Weight: 1.00
Name: Consensus Len: 591 Check: 609 Weight: 0.00
//
1 130
MRPS23 ATGGCAGGC AGCCGGCTGG AAACCGTAGG GAGCATCTTC TCTCGGACTC GGGACCTGGT TCGGGCCGGG GTGCTG---- --------AA GGAGAAGCCC CTGTGGTTTG ACGTATATGA CGCCTTTCCC
MRPS23P1 GAACATCTAC AGCTGGCTGG AAATCGCAGG GAGCATCTTT TTGCAGACTC AGTATGTGAT TTGAGCAGGA GTGCTGTAGG AGAAATTGAA GGAGAAACCT CTCTAGCATC ACATACATAA CACCTTTCCC
Consensus .AacacagaC AGCcGGCTGG AAAcCGcAGG GAGCATCTTc TcgCaGACTC aGgAccTGaT TcGaGCaGGa GTGCTG.... ........AA GGAGAAaCCc CTcTaGcaTc ACaTAcATaA CaCCTTTCCC
131 260
MRPS23 CCGCTGAGGG AGCCCGTCTT CCAAAGGCCT CGAGTGCGAT ATGGCAAAGC CAAAGCTCCC ATCCAAGACA TCTGGTACCA CGAGGATCGG ATTAGAGCGA AGTTTTATTC AGTGTATGGG TCTGGTCAAA
MRPS23P1 CTGTGGAAGG AGCCAGTCTT CCAGAGGCCC CACTTATGAT ATGGCAAAGC CAAAATTC-- ---------- ---------- ---------- ---------- -----TATTC AGCCTACAAA TCTGGTCAAA
Consensus CcGcgGAaGG AGCCaGTCTT CCAaAGGCCc CaagTacGAT ATGGCAAAGC CAAAacTC.. .......... .......... .......... .......... .....TATTC AGccTAcaaa TCTGGTCAAA
261 390
MRPS23 GAGCTTTTGA TCTATTCAAT CCAAACTTCA AGTCTACCTG TCAACGGTTT GTGGAGAAGT ACACTGAGCT ACAGAAACTT GGAGAAACAG ATGAAGAGAA GTTATTTGTG GAAACAGGGA AGGCTTTATT
MRPS23P1 -AGCTTTTGA TCTGTTCAAT CCAAGCTTCA AGCCTACCTG TCAATGCTTT GTG---AAGT ATATTGAGCT GCAGAAACTT AAAGAAACAG ATGAAGAGAA GTTATTTGTA GAAACAAGGA AAGCTTTATT
Consensus .AGCTTTTGA TCTaTTCAAT CCAAaCTTCA AGcCTACCTG TCAAcGcTTT GTG...AAGT AcAcTGAGCT aCAGAAACTT aaAGAAACAG ATGAAGAGAA GTTATTTGTa GAAACAaGGA AaGCTTTATT
391 520
MRPS23 GGCAGAAGGT GTCATTTTAA GACGAGTAGG CGAAGCAAGG ACTCAACACG GAGGTAGTCA CGTTTCCCGG AAATCCGAAC ACTTGAGTGT CAGACCACAG ACTGCGTTGG AAGAAAACGA GACTCAGAAA
MRPS23P1 GGCAGAAAGT GTCATTTTAA GATGCGTAGG AGAAACAAGG ACTCAACAGG AAGGTAGTCA CGTTTCCTGG AAATCTGAAC ACATGATTGT CAGACCCCAA ACTGTGTTGA AAGAAAACCA GCCTCAGAAA
Consensus GGCAGAAaGT GTCATTTTAA GAcGaGTAGG aGAAaCAAGG ACTCAACAcG aAGGTAGTCA CGTTTCCcGG AAATCcGAAC ACaTGAgTGT CAGACCaCAa ACTGcGTTGa AAGAAAACcA GaCTCAGAAA
521 591
MRPS23 GAA----GTT CCACAGGACC AGCATTTGGA GGCACCTGCA GACCAGTCGA AAGGTCTCTT GCCTCCCTGA
MRPS23P1 GAAAGAAGTT CCACAGGACC AGCATTTGGA AGCACCTGAA GGACAGTTAA AAGGTCTTGC AGCTCCGTGA A
Consensus GAA....GTT CCACAGGACC AGCATTTGGA aGCACCTGaA GaaCAGTcaA AAGGTCTcgc acCTCCcTGA .