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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 532 Check: 0 ..
Name: MRPS25 Len: 532 Check: 8888 Weight: 1.00
Name: MRPS25P1 Len: 532 Check: 2073 Weight: 1.00
Name: Consensus Len: 532 Check: 1926 Weight: 0.00
//
1 130
MRPS25 ATGCCCATGA AGGGCCGCTT CCCCATCCGC CGCACCCTGC AATATCTGAG CCAGGGGAAC GTGGTGTTCA AGGACTCCGT GAAGGTCATG ACAGTGAATT ACAACACGCA TGGGGAGCTG GGCGAGGGCG
MRPS25P1 ATGCCCATGA AGGGCCGCTC CCCCATC-GC CACACCCTGC AGTACCTGAG CCAGGGGGAG GTGGTGTTCA AAGACTTGGC GAAGGTCATG ACAGTGAATT ACAAAACACA TGGGGAGCTG GGTGAGGGCA
Consensus ATGCCCATGA AGGGCCGCTc CCCCATC.GC CaCACCCTGC AaTAcCTGAG CCAGGGGaAc GTGGTGTTCA AaGACTccGc GAAGGTCATG ACAGTGAATT ACAAaACaCA TGGGGAGCTG GGcGAGGGCa
131 260
MRPS25 CCAGGAAGTT TGTGTTTTTC AACATACCTC AGATTCAATA CAAAAACCCT TGGGTGCAGA TCATGATGTT TAAGAACATG ACGCCGTCAC CCTTCCTG-- --------CG ATTCTACTTA GATTCTGGGG
MRPS25P1 CCAGGAAATT TGCGTTTT-C AACATATCTT AGATCCAATA CAAAATCCCA TGAGTGCAGA TCATGATGTT TAAGGACAGG ATGCCATCAT CCTTCCTGTC TCCACACCCA CCAATACTTA GATTCTGGGA
Consensus CCAGGAAaTT TGcGTTTT.C AACATAcCTc AGATcCAATA CAAAAaCCCa TGaGTGCAGA TCATGATGTT TAAGaACAgG AcGCCaTCAc CCTTCCTG.. ........Ca acaaTACTTA GATTCTGGGa
261 390
MRPS25 AGCAGGTCCT GGTGGATGTG GAGACCAAGA GCAATAAGGA GATCATGGAG CACATCAGAA AAATCTTGGG GAAGAATGAG GAAACCCTCA GGGAAGAGGA GGAGGAGAAA AAGCAGCTTT CTCACCCAGC
MRPS25P1 AGCAAGTCCC GTTGGATGTG GAGACCAAGA ATAATAAGGA GGTCATTGAG TCCATC-GAA AAATGTTGGG GAAGAATGAG GAAACCCCCA AGAAAGAGGA GAAGGAGAAA AAGCAGCTGT CTCACCCAGC
Consensus AGCAaGTCCc GgTGGATGTG GAGACCAAGA acAATAAGGA GaTCATgGAG caCATC.GAA AAATcTTGGG GAAGAATGAG GAAACCCcCA aGaAAGAGGA GaAGGAGAAA AAGCAGCTgT CTCACCCAGC
391 520
MRPS25 CAACTTCGGC CCTCGAAAGT ACTGCCTGCG GGAGTGCATC TGTGAAGTGG AAGGGCAGGT GCCCTGCCCC AGCCTGGTGC CATTACCCAA GGAGATGAGG GGGAAGTACA AAGCCGCTCT GAAAGCCGAT
MRPS25P1 CCCCTTTGGC CGTGGAAAGT ACTGCCTGAA GGATTGTACC TGCAAAGTGG AAGGACAGGT GCCCTGCCTG GGCCTGAT-- ----ACCCAA GGAGATG--- GGGAAGTGCA GAGCCACTGT GAAAGTCAGT
Consensus CaaCTTcGGC CcTcGAAAGT ACTGCCTGaa GGAgTGcAcC TGcaAAGTGG AAGGaCAGGT GCCCTGCCcc aGCCTGaT.. ....ACCCAA GGAGATG... GGGAAGTaCA aAGCCaCTcT GAAAGcCaaT
521 532
MRPS25 GCCCAGGACT AA
MRPS25P1 ACCCAGGACT AG
Consensus aCCCAGGACT Aa