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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 685 Check: 0 ..
Name: MRPS35 Len: 685 Check: 7504 Weight: 0.66
Name: MRPS35P3 Len: 685 Check: 43 Weight: 0.66
Name: MRPS35P2 Len: 685 Check: 3758 Weight: 1.28
Name: MRPS35P1 Len: 685 Check: 6526 Weight: 1.41
Name: Consensus Len: 685 Check: 4149 Weight: 0.00
//
1 130
MRPS35 ATGGCAAAGG AGGGAAATCT AGAACTTTTA AAGATTCCCA ATTTTCTGCA TTTGACTCCT GTAGCAATTA AAAAGCACTG TGAAGCCCTT AAAGATTTTT GCACTGAGTG GCCAGCCGCA CTGGACAGTG
MRPS35P3 GATTTCT GCACTGAGTG GCCAGCAGCA TCAGAC--TT
MRPS35P2
MRPS35P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
131 260
MRPS35 ACGAGAAATG TGAGAAGCAT TTTCCAATTG AAATTGACAG CACTGATTAT GTTTCATCAG GACCATCTGT TCGGAACCCC AGAGCACGAG TAGTAGTCTT AAGAGTAAAG CTTTCCAGTT TGAATTTAGA
MRPS35P3 GTGAGAAATA TGAGTAGCAC TGCCCAATTA AAACTCATTT AACTGATTAT GTTTCAGCAG AATTATCCAT TCAAAATCCC AAAGTA-GAG TAGGAACCTT ATCGAGTAAA CTTTCCAATC TGAATTTAAG
MRPS35P2
MRPS35P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
261 390
MRPS35 TGATCACGCA AAGAAGAAAT TAATTAAACT TGTAGGAGAG CGATACTGCA AGACCACAGA TGTGCTTACC ATCAAAACAG ATAGGTGCCC TTTAAGGAGG CAGAATTACG ATTATGCAGT GTATCTACTA
MRPS35P3 TGATCATGTG AAGAAAAAAT ATACTAAACT TGCAAGAGAG CAATACTTTA AGACCACAGA AATGTTCACC AGCAAAAC-- ---------- --------GA CAGAATTATG ATTATGCAAT TTATCCACTC
MRPS35P2
MRPS35P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
391 520
MRPS35 ACAGTGTTAT ACCATGAGTC TTGGAATACT GAAGAATGGG AAAAAAGTAA GACTGAAGCA GACATGGAAG AGTATATATG GGAAAATAGC TCATCAGAAA GAAATATCCT GGAAACGCTT CTCCAGATGA
MRPS35P3 ACAGTTTCAT ACCTTGAATC TT---AAACC AGAGAGTAAG AGAAAA--AA GATGGAAGCA CATGGGAAGG AATATCTATG A-AAAACAGT TCATAAAAGA AAAATAT--- --AAAAAAAT TTACAAATTA
MRPS35P2 T GAAAACATTT ATCCAAATTA
MRPS35P1 AGAATGGA AACAAAATAA GACTGAAGCA GATGTGGGAG AATATATGTG GGAAAATAAA TCCTTGGGAT AAAAAATCCT GGAAACATTT CTCCAAATTA
Consensus .......... .......... .......... ..agaatgg. aa.aaa.taa gactgaagca gatgtgg.ag aatatat.tg ggaaaata.. tc.t..g.a. aaaa.atcct ggAAAcattT cTcCAaATtA
521 650
MRPS35 AAGCTGCTGA GAAAAATATG GAAATAAATA AAGAAGAGCT CCTTGGTACT AAAGAAATTG AAGAGTACAA AAAGTCTGTT GTTAGTCTTA AAAATGAGGA GGAAAATGAA AATTCCATTT CTCAGTACAA
MRPS35P3 AAGCTACTGA TAAAAACA-- ---------A AAAAAGAACA CTATTGTTCT AAACAAG--- --GATCACAA AATATCTGTT ---CATTTTA AGAATGAGAA GAAGGATAAA AATAGCATGT CTAAGTACAA
MRPS35P2 AAGCTGCTGA GAAATATAAG GAA-----TA AATAAGAGCT TCTTGGTACC AAAGAAAC-G AAGATTACAG AATGTCCTTT GTTAGTCTTA AGAATGAAGG GGAAAATGAA AATACCCTTT CTCAGTACAA
MRPS35P1 AAGCTGCTAA GAAAAATTTG AA-------A GTAAAGG
Consensus AAGCTgCTgA gAAAaAtatg .a.......A aaaAAGa.c. ...t.gt.c. aaa.aa.... ..ga..aca. aa..tc..tt .....t.tta a.aatga... g.a..at.aa aat..c.t.t ct.agtacaa
651 685
MRPS35 AGAATCCGTG AAGAGACTAT TAAATGT-GA CATGA
MRPS35P3 AGAATCAGTG GAAAGGAAGG TACATATTGA ATTGA
MRPS35P2 AGAATCAGTG AAGAGACTAT TAAAT-TTGA CATGA
MRPS35P1
Consensus agaatc.gtg .a.ag..... ta.at.t.ga ..tga