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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 316 Check: 0 ..
Name: MRPS36_CDS Len: 316 Check: 9216 Weight: 0.40
Name: MRPS36P1 Len: 316 Check: 9171 Weight: 0.40
Name: MRPS36P4 Len: 316 Check: 291 Weight: 0.40
Name: MRPS36P5 Len: 316 Check: 4911 Weight: 0.40
Name: MRPS36P6 Len: 316 Check: 5464 Weight: 1.41
Name: MRPS36P3 Len: 316 Check: 2067 Weight: 1.87
Name: MRPS36P2 Len: 316 Check: 7540 Weight: 2.12
Name: Consensus Len: 316 Check: 4856 Weight: 0.00
//
1 130
MRPS36_CDS ATGATGGGC AGCAAGATGG CGTCTGCTAG TAGGGTCGTT CAGGTAGTCA AACCACACAC TCCATTAATA AGGTTTCCTG ACAGAAGAGA CAATCCTAAA CC-CAATGTA TCAGAAGCTT TGAGATCAGC
MRPS36P1 ACGATTGGC AGCAAGATGG CGTCTGCCAG TAGGGTCGTT CAGGTAGTCA AACCACACAC TCCATTAATA AGGTTTCCTG ACAGAAGAGA CAATCCTAAA CC-CAATGTA TCAGAAGCTT TGAGATCAGC
MRPS36P4 CATGATGGGC AGCAAGATG- CATCTGCTAG CAGTGTCGTT CAGGTAGTCA AGCCACATGC TCCATTAATA AGCTTCCCTG CTGGAAGAGA CAATCCTAAA CC-CAATGTA CCAGAAGCTC TGAGATCAGC
MRPS36P5 ATGATGACT AGCAAAATGG CAACTGCCAG CAGGATGGTT CAGGTACTTA AATTACATAC TCCATTAATA AGGTTCCCTG ACAGA-GAGA CCATTCTAAG CC-CAATACA TCAGAAGCTT TGAGATCAGC
MRPS36P6 TCAA--GGCA GTGTTCCTCC ACAGAAGAGG CAACCCTAAA AATCAATGAA TCAG---CTT TGGAATCAGC
MRPS36P3
MRPS36P2
Consensus ......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
131 260
MRPS36_CDS AGGGCTACCA TCTCACTCTT CTGTAATTTC ACAACATTCT AAAGGAAGTA AATCACCAGA TTTGCTGATG TATCAGGGTC CACCAGACAC TGCAGAAATA ATAAAAACAT TACCTCAGAA ATACAGAAGG
MRPS36P1 AGGGCTACCA TCTCACTCTT CTGTAATTTC ACAACATTCT AAGGGA--TA CATCACCAGA TTTGCTAATG TATCAGGGTC CACCAGACAC TGCAGAAATA ATAAAAACAT TACCTCAGAA ATACAGAAGC
MRPS36P4 AGGGCAACCA TCTCACGATT CTGCAATTTC CCAGCATTCT AAGGGAAGTA AATTACTGGA TTTGTGGATG TA-------- --CCAGACAC TGCAGAAGTA ATGAAAACAT TACCTCAGAA ATATAGAAGT
MRPS36P5 AGGACTATTA TCTCACTCCT CTTCAATTTC ACAG-ATTCT AAGAAAAGCA AATCACCAGC TTTGCTTACA CATCAGGGTC TGCCAGACAC TGCAGAAATA ATAAAAACAC TACCTCAGAA ---------G
MRPS36P6 AGGAATACCG TC---CAGCT CTGCAGTTTC ACAGCATTCT GAGGGAAGGG AATTGCCAGA TTGGTTGATG CAGCAGGGTC CACCAGACAC TGCAGAAATT ATTAAAT-AT TGTCTCAGAA TTATAGACGG
MRPS36P3 AACC CCTAGAAGTA AATCACCAGA TTTGCTGACG TATCAGGGTC CACCAGACAC TGCAGAAATA ATGAAAACAT TACCTCAGAA ATACAG----
MRPS36P2 TGGGA TGGCAGACAA TGCAGAA-TA ATAAAAACAT TACCCTAGAA ATACAGAAGG
Consensus .......... .......... .......... ........c. ....gaag.. aat..ccaga tt.g.tga.g .a.cagGGtc cacCAGACAc TGCAGAAaTa AT.AAAacAT TacCtcAGAA aTAcAGa.gg
261 316
MRPS36_CDS AAACTTGTGT CTCAAGAAGA AATGGAATTT ATCCAACGTG GAGGTCCTGA ATAA
MRPS36P1 AAACTTGTGT CTCAAGAAGA AATTGAATTT ATCCAATGTG GAGGTCCTGA ATAA
MRPS36P4 AAACTTGTGT CTCAAGAAGA AATTGAATTT GTCCATTGTG GAGATCCAGA ATAA
MRPS36P5 AAATTTATGT CTCAAGAAGA AATCAAATTT ATCCAATGTG GA-CTGCTGT TTGTCA
MRPS36P6 AAATTTGTGT CTCAGGAGGA AACTGGCTGG AAT
MRPS36P3 AAACTTGTGT CTTAAGAAGA AGTTGAATTT GTCCACTGTG AAG
MRPS36P2 AAACTCCTGT CTCAAGAAGA AATTGAACGT ACTCAATGTG GAGGCCCAGA ATCA
Consensus AAAcTtgTGT CTcAaGAaGA AattGaatgt a.tca.tgtg gag...c.g. .t..