Go directly to Alignment 
Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
 ! is anyone of IV
 $ is anyone of LM
 % is anyone of FY
 # is anyone of NDQEBZ

 MSF:   1306    Check:   0         ..
 Name: MRPS5          Len:  1306  Check: 4230  Weight:  0.64
 Name: MRPS5P3        Len:  1306  Check: 8367  Weight:  0.64
 Name: MRPS5P2        Len:  1306  Check: 5130  Weight:  1.18
 Name: MRPS5P4        Len:  1306  Check: 5130  Weight:  1.18
 Name: MRPS5P1        Len:  1306  Check:  947  Weight:  1.37
 Name: Consensus      Len:  1306  Check: 5493  Weight:  0.00

//

            1                                                                                                                                          130
     MRPS5  ATGGCGACCG CGGTGCGCGC TGTGGGCTGC CTCCCCGTGC TGTGTAGCGG GACGGCAGGT CATTTATTGG GGAGGCAGTG TTCCCTAAAC ACCTTACCAG CAGCTTCCAT TTTGGCATGG AAGAGTGTTC
   MRPS5P3  ATGGTGACGG CGGTGCGCGC TGTGGGCCGC CTCCCTGCGC TGTGCAGCGG GACAGCGGGT CATTTATTGG GGAGGCAGCT TTCCCTAAAC ACCTTACCAA CAGCTTCCAT TTTGGCATGG GAGACTGCTC
   MRPS5P2                                                                                                                                                
   MRPS5P4                                                                                                                                                
   MRPS5P1                                                                                                                                                
 Consensus  .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........

            131                                                                                                                                        260
     MRPS5  TCGGCAATGG CCATTTGTCA TCACTGGGAA CCAGAGACAC CCATCCCTAC GCCAGCTTGA GCCGTGCACT GCAGACACAA TGCTGTATTT CTTCTCCCAG TCACCTGATG AGCCAGCAGT ATAGACCATA
   MRPS5P3  TCAGCAATGG CCCTTTGTCA TCACTGGGAA CCAGAGACAT CCGTCCTTAT GCCAGCTTGA GCCGTACGTT GCAGACACTA TGCTGTATTT CTTCTCCCAG TCATCTGATG GGCCAGCAGT ATAGACCGTA
   MRPS5P2                                                                                                                                                
   MRPS5P4                                                                                                                                                
   MRPS5P1                                                                                                                                                
 Consensus  .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........

            261                                                                                                                                        390
     MRPS5  TAGTTTCTTC ACTAAATTGA CTGCAGATGA G--CTGTGGA AAGGCGCTTT AGCAGAGACT GGTGCTGGAG CAAAAAAAGG AAGAGGCAAA AGAACTAAAA AGAAGAAAAG AAAGGATCTG AACAGGGGTC
   MRPS5P3  CAGTTTCTTC ACTAAATTGA CTGTAGATGA GAGCTGTGGA AAGGTGCTTT AGCAGAGACT GGTGCCGGAG CAAGAAAAGG AAGAGGCAAA AGAACTAAAA AAAAGAAAGG AAAGGATCTG AACAGGGGTC
   MRPS5P2                                                                                                                                                
   MRPS5P4                                                                                                                                                
   MRPS5P1                                                                                                                                                
 Consensus  .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........

            391                                                                                                                                        520
     MRPS5  AGATCATTGG TGAAGGGCGT TATGGTTTTC TATGGCCCGG ACTGAATGTC CCTCTTATGA AAAATGGAGC AGTGCAGACC ATTGCCCAAA GAAGCAAGGA AGAGCAGGAG AAGGTGGAGG CAGACATGAT
   MRPS5P3  AGATCATTGG TGAAGGGCGT TATGGTTTTC TGTGGCCTGA TCTGAATGTC CCTCTTATGA AAAATGAAGT AAAGCAGACC ATTGCCCAAA GAAGCAAGGA AGAGCAGGAG AAGGTGGAGG CGGACATGAT
   MRPS5P2                                                                                                                                                
   MRPS5P4                                                                                                                                                
   MRPS5P1                                                                                                                                                
 Consensus  .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........

            521                                                                                                                                        650
     MRPS5  CCAGCAGAGA GAAGAGTGGG ACCGAAAGAA GAAGATGAAG GTTAAACGGG AGCGAGGATG GAGTGGAAAC TCATGGGGAG GCATCAGTCT TGGCCCCCCT GACCCTGGTC CCTGTGGAGA AACATATGAG
   MRPS5P3  CCAGCAGAGA --AGAGTGGG ACCTAAAGAG GAAGATGAAG ATTAAATGGG AGCGAGGAAG GAGTGGAAAC TCATGGAGAG GCATCAGTCA TGGCCCCACT GACCCTGGTT CCAATGGAGA AACATATGAG
   MRPS5P2                                                                                                                                                
   MRPS5P4                                                                                                                                                
   MRPS5P1                                                                                                                                                
 Consensus  .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........

            651                                                                                                                                        780
     MRPS5  GATTTTGATA CCAGGATACT TGAGGTAAGA AACGTTTTCA CTATGACTGC G-AAAGAGGG AAGAAAGAAA TCGATCCGTG TCTTGGTGGC TGTGGGGAAC GGAAAAGGAG CTGCAGGTTT TTCTATTGGG
   MRPS5P3  GATTTTGATA CCAGGATACT TGAAGTAAGA AATGTTTTCA ATATGACAGC GGAAAGAGGG AAGAAAGAAA TCGGTCCGTG TCCTGGTGGC TGTGGGGAAC GGAAAAGGAG CTGCAGGTTT TGCTGTTGGG
   MRPS5P2                                                                                                                                                
   MRPS5P4                                                                                                                                                
   MRPS5P1                                                                                                                                                
 Consensus  .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........

            781                                                                                                                                        910
     MRPS5  AAAGCTACTG ATCGGATGGA TGCTTTCAGG AAAGCAAAGA ACAGAGCAGT TCACCATTTG CATTATATAG AACGATATGA A--------- -GACCATACA ATATTCCATG ATATTTCATT AAGATTTAAA
   MRPS5P3  AAAACCACTG AACGGGTGGA CGCTTTTAGG AAAGCAAAGA ACAGAGCAGT TCACTATGTG CATTATGTAG AACGATATGA ATATTGTATA AGACCATATA ATTTTCCATG ATATTTCATT AAGATTTAAA
   MRPS5P2                                                                                                                                                
   MRPS5P4                                                                                                                                                
   MRPS5P1                                                                                                                                                
 Consensus  .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........

            911                                                                                                                                       1040
     MRPS5  AGGACGCATA TCAAGATGAA GAAACAACCC AAAGGTTACG GCCTCCGCTG CCACAGGGCC ATCATCACCA TCTGCCGGCT CATTGGCATC AAAGACATGT ATGCCAAGGT CTCTGGGTCC ATTAATATGC
   MRPS5P3  AGGACACATA TCAAGATGAA GAAACAACCC AAAGGTTACG GCCTCCACTG CCACAGGGCC ATCATCACCA TCTGCAGTAT CATTTGCATC AAAGACATGT ATGCCAAGGT CTCTGGGTCC GTCAATATGC
   MRPS5P2                                        TATTA AATACTGCTA TCA----GCC ATCATCACCA TCTGCTGGCT CATTGGCATC AAAGACTTGT ATGCCAAGGT CTTTGGGTCC GTCAGTATGC
   MRPS5P4                                        TATTA AATACTGCTA TCA----GCC ATCATCACCA TCTGCTGGCT CATTGGCATC AAAGACTTGT ATGCCAAGGT CTTTGGGTCC GTCAGTATGC
   MRPS5P1                                     AGGTTACG GCCTCCGCTG CCACAGGGCC ATCATCACCA TCTGCCGGCT CATTGGCATC AAAGACATGT ATGCCAAGGT CTCTGGGTCC ATTAATATGC
 Consensus  .......... .......... .......... ..aggTtacg gcctCcgCTg cCAcaggGCC ATCATCACCA TCTGC.GgcT CATTgGCATC AAAGACaTGT ATGCCAAGGT CTcTGGGTCC gTcAaTATGC

            1041                                                                                                                                      1170
     MRPS5  TCAGCCTCAC CCAGGGCCTC TTCCGTGGGC TCTCCAGACA GGAAACCCAT CAACAGCTGG CTGATAAGAA GGGCCTCCAT GTTGTGGAAA TCCGGGAGGA ATGTGGCCCT CTGCCCATTG TGGTTGCGTC
   MRPS5P3  CCAACCTCAC CTGGGGCCTC TTCCATGGGC TCTCCAGACA GAAAACCCAT CAACAGCTGG CTGTTAAGAA GGGCCTCCAT GCTGTGGAAA TCCAGGAGGA ATGTGGCCCT CTGCCTATCC TGGTTACCTC
   MRPS5P2  CCAACCTCAC CTGGGGCCTC TTTCGTGGGC TCTCCAGCCG GGAAATCCAT CAACAGCTGG CTGATAAAAA GGGCCTCTAC ---------- ---------A TTGTGGCCCT CTGCCTGGAG TGGTTGCCTA
   MRPS5P4  CCAACCTCAC CTGGGGCCTC TTTCGTGGGC TCTCCAGCCG GGAAATCCAT CAACAGCTGG CTGATAAAAA GGGCCTCTAC ---------- ---------A TTGTGGCCCT CTGCCTGGAG TGGTTGCCTA
   MRPS5P1  TCAGCCTCAC CCAGGGCCTC TTCCGTGGGC TCTCCAGACA GGTAATCCTT                                                                                        
 Consensus  cCAaCCTCAC CtgGGGCCTC TTcCgTGGGC TCTCCAGaCa GgaAAtCCaT caacagctgg ctgataa.aa gggcctc.a. .......... .........a .tgtggccct ctgcct...g tggttgcct.

            1171                                                                                                                                      1300
     MRPS5  CCCCCGGGGG CCCTTGAGGA AGGATCCAGA GCCAGAAGAT GAGGTTCCAG ACGTCAAACT GGACTGGGAA GATGTGAAGA CTGCACAGGG AATGAAGCGC TCTGTGTGGT CTAATTTGAA GAGAGCCGCC
   MRPS5P3  CTCCCGGGGG GCCTTAAGTA AAGATCCGGA GACAAATGAT GAGGTTCCAG ACATCAAACT GGACTGGAAA GATGTGAAGA CTGCACAGGG AGAGAAACGC TCTCTCTGGT CTGGTTTAAA GAGAGCCGCC
   MRPS5P2  CCCCTGGGGG CCCTTGAGAA ATGATCCAGA GCTGGATGAT TAGGTTCCAG ACATCAATCT GGACTAGGAA GAAGTGAAGG CTGTGCAGCG AATGAAGTGC TCTGTATGGT CCAGTTTAAA GAGAGTTGCC
   MRPS5P4  CCCCTGGGGG CCCTTGAGAA ATGATCCAGA GCTGGATGAT TAGGTTCCAG ACATCAATCT GGACTAGGAA GAAGTGAAGG CTGTGCAGCG AATGAAGTGC TCTGTATGGT CCAGTTTAAA GAGAGTTGCC
   MRPS5P1                                                                                                                                                
 Consensus  cccc.ggggg cccttgag.a a.gatccaga gc..gatgat .aggttccag acatcaa.ct ggact.ggaa ga.gtgaag. ctg..cag.g aatgaag.gc tctgt.tggt c.agtttaaa gagag..gcc

            1301 
     MRPS5  ACGTAA
   MRPS5P3  ACCTAA
   MRPS5P2  AGGTAA
   MRPS5P4  AGGTAA
   MRPS5P1        
 Consensus  a.gtaa