Go directly to Alignment Multalin version 5.4.1 Copyright I.N.R.A. France 1989, 1991, 1994, 1996 Published research using this software should cite Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890 Symbol comparison table: blosum62 Gap weight: 12 Gap length weight: 2 Consensus levels: high=90% low=50% Consensus symbols: ! is anyone of IV $ is anyone of LM % is anyone of FY # is anyone of NDQEBZ MSF: 1306 Check: 0 .. Name: MRPS5 Len: 1306 Check: 4230 Weight: 0.64 Name: MRPS5P3 Len: 1306 Check: 8367 Weight: 0.64 Name: MRPS5P2 Len: 1306 Check: 5130 Weight: 1.18 Name: MRPS5P4 Len: 1306 Check: 5130 Weight: 1.18 Name: MRPS5P1 Len: 1306 Check: 947 Weight: 1.37 Name: Consensus Len: 1306 Check: 5493 Weight: 0.00 //
1 130 MRPS5 ATGGCGACCG CGGTGCGCGC TGTGGGCTGC CTCCCCGTGC TGTGTAGCGG GACGGCAGGT CATTTATTGG GGAGGCAGTG TTCCCTAAAC ACCTTACCAG CAGCTTCCAT TTTGGCATGG AAGAGTGTTC MRPS5P3 ATGGTGACGG CGGTGCGCGC TGTGGGCCGC CTCCCTGCGC TGTGCAGCGG GACAGCGGGT CATTTATTGG GGAGGCAGCT TTCCCTAAAC ACCTTACCAA CAGCTTCCAT TTTGGCATGG GAGACTGCTC MRPS5P2 MRPS5P4 MRPS5P1 Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... 131 260 MRPS5 TCGGCAATGG CCATTTGTCA TCACTGGGAA CCAGAGACAC CCATCCCTAC GCCAGCTTGA GCCGTGCACT GCAGACACAA TGCTGTATTT CTTCTCCCAG TCACCTGATG AGCCAGCAGT ATAGACCATA MRPS5P3 TCAGCAATGG CCCTTTGTCA TCACTGGGAA CCAGAGACAT CCGTCCTTAT GCCAGCTTGA GCCGTACGTT GCAGACACTA TGCTGTATTT CTTCTCCCAG TCATCTGATG GGCCAGCAGT ATAGACCGTA MRPS5P2 MRPS5P4 MRPS5P1 Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... 261 390 MRPS5 TAGTTTCTTC ACTAAATTGA CTGCAGATGA G--CTGTGGA AAGGCGCTTT AGCAGAGACT GGTGCTGGAG CAAAAAAAGG AAGAGGCAAA AGAACTAAAA AGAAGAAAAG AAAGGATCTG AACAGGGGTC MRPS5P3 CAGTTTCTTC ACTAAATTGA CTGTAGATGA GAGCTGTGGA AAGGTGCTTT AGCAGAGACT GGTGCCGGAG CAAGAAAAGG AAGAGGCAAA AGAACTAAAA AAAAGAAAGG AAAGGATCTG AACAGGGGTC MRPS5P2 MRPS5P4 MRPS5P1 Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... 391 520 MRPS5 AGATCATTGG TGAAGGGCGT TATGGTTTTC TATGGCCCGG ACTGAATGTC CCTCTTATGA AAAATGGAGC AGTGCAGACC ATTGCCCAAA GAAGCAAGGA AGAGCAGGAG AAGGTGGAGG CAGACATGAT MRPS5P3 AGATCATTGG TGAAGGGCGT TATGGTTTTC TGTGGCCTGA TCTGAATGTC CCTCTTATGA AAAATGAAGT AAAGCAGACC ATTGCCCAAA GAAGCAAGGA AGAGCAGGAG AAGGTGGAGG CGGACATGAT MRPS5P2 MRPS5P4 MRPS5P1 Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... 521 650 MRPS5 CCAGCAGAGA GAAGAGTGGG ACCGAAAGAA GAAGATGAAG GTTAAACGGG AGCGAGGATG GAGTGGAAAC TCATGGGGAG GCATCAGTCT TGGCCCCCCT GACCCTGGTC CCTGTGGAGA AACATATGAG MRPS5P3 CCAGCAGAGA --AGAGTGGG ACCTAAAGAG GAAGATGAAG ATTAAATGGG AGCGAGGAAG GAGTGGAAAC TCATGGAGAG GCATCAGTCA TGGCCCCACT GACCCTGGTT CCAATGGAGA AACATATGAG MRPS5P2 MRPS5P4 MRPS5P1 Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... 651 780 MRPS5 GATTTTGATA CCAGGATACT TGAGGTAAGA AACGTTTTCA CTATGACTGC G-AAAGAGGG AAGAAAGAAA TCGATCCGTG TCTTGGTGGC TGTGGGGAAC GGAAAAGGAG CTGCAGGTTT TTCTATTGGG MRPS5P3 GATTTTGATA CCAGGATACT TGAAGTAAGA AATGTTTTCA ATATGACAGC GGAAAGAGGG AAGAAAGAAA TCGGTCCGTG TCCTGGTGGC TGTGGGGAAC GGAAAAGGAG CTGCAGGTTT TGCTGTTGGG MRPS5P2 MRPS5P4 MRPS5P1 Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... 781 910 MRPS5 AAAGCTACTG ATCGGATGGA TGCTTTCAGG AAAGCAAAGA ACAGAGCAGT TCACCATTTG CATTATATAG AACGATATGA A--------- -GACCATACA ATATTCCATG ATATTTCATT AAGATTTAAA MRPS5P3 AAAACCACTG AACGGGTGGA CGCTTTTAGG AAAGCAAAGA ACAGAGCAGT TCACTATGTG CATTATGTAG AACGATATGA ATATTGTATA AGACCATATA ATTTTCCATG ATATTTCATT AAGATTTAAA MRPS5P2 MRPS5P4 MRPS5P1 Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... 911 1040 MRPS5 AGGACGCATA TCAAGATGAA GAAACAACCC AAAGGTTACG GCCTCCGCTG CCACAGGGCC ATCATCACCA TCTGCCGGCT CATTGGCATC AAAGACATGT ATGCCAAGGT CTCTGGGTCC ATTAATATGC MRPS5P3 AGGACACATA TCAAGATGAA GAAACAACCC AAAGGTTACG GCCTCCACTG CCACAGGGCC ATCATCACCA TCTGCAGTAT CATTTGCATC AAAGACATGT ATGCCAAGGT CTCTGGGTCC GTCAATATGC MRPS5P2 TATTA AATACTGCTA TCA----GCC ATCATCACCA TCTGCTGGCT CATTGGCATC AAAGACTTGT ATGCCAAGGT CTTTGGGTCC GTCAGTATGC MRPS5P4 TATTA AATACTGCTA TCA----GCC ATCATCACCA TCTGCTGGCT CATTGGCATC AAAGACTTGT ATGCCAAGGT CTTTGGGTCC GTCAGTATGC MRPS5P1 AGGTTACG GCCTCCGCTG CCACAGGGCC ATCATCACCA TCTGCCGGCT CATTGGCATC AAAGACATGT ATGCCAAGGT CTCTGGGTCC ATTAATATGC Consensus .......... .......... .......... ..aggTtacg gcctCcgCTg cCAcaggGCC ATCATCACCA TCTGC.GgcT CATTgGCATC AAAGACaTGT ATGCCAAGGT CTcTGGGTCC gTcAaTATGC 1041 1170 MRPS5 TCAGCCTCAC CCAGGGCCTC TTCCGTGGGC TCTCCAGACA GGAAACCCAT CAACAGCTGG CTGATAAGAA GGGCCTCCAT GTTGTGGAAA TCCGGGAGGA ATGTGGCCCT CTGCCCATTG TGGTTGCGTC MRPS5P3 CCAACCTCAC CTGGGGCCTC TTCCATGGGC TCTCCAGACA GAAAACCCAT CAACAGCTGG CTGTTAAGAA GGGCCTCCAT GCTGTGGAAA TCCAGGAGGA ATGTGGCCCT CTGCCTATCC TGGTTACCTC MRPS5P2 CCAACCTCAC CTGGGGCCTC TTTCGTGGGC TCTCCAGCCG GGAAATCCAT CAACAGCTGG CTGATAAAAA GGGCCTCTAC ---------- ---------A TTGTGGCCCT CTGCCTGGAG TGGTTGCCTA MRPS5P4 CCAACCTCAC CTGGGGCCTC TTTCGTGGGC TCTCCAGCCG GGAAATCCAT CAACAGCTGG CTGATAAAAA GGGCCTCTAC ---------- ---------A TTGTGGCCCT CTGCCTGGAG TGGTTGCCTA MRPS5P1 TCAGCCTCAC CCAGGGCCTC TTCCGTGGGC TCTCCAGACA GGTAATCCTT Consensus cCAaCCTCAC CtgGGGCCTC TTcCgTGGGC TCTCCAGaCa GgaAAtCCaT caacagctgg ctgataa.aa gggcctc.a. .......... .........a .tgtggccct ctgcct...g tggttgcct. 1171 1300 MRPS5 CCCCCGGGGG CCCTTGAGGA AGGATCCAGA GCCAGAAGAT GAGGTTCCAG ACGTCAAACT GGACTGGGAA GATGTGAAGA CTGCACAGGG AATGAAGCGC TCTGTGTGGT CTAATTTGAA GAGAGCCGCC MRPS5P3 CTCCCGGGGG GCCTTAAGTA AAGATCCGGA GACAAATGAT GAGGTTCCAG ACATCAAACT GGACTGGAAA GATGTGAAGA CTGCACAGGG AGAGAAACGC TCTCTCTGGT CTGGTTTAAA GAGAGCCGCC MRPS5P2 CCCCTGGGGG CCCTTGAGAA ATGATCCAGA GCTGGATGAT TAGGTTCCAG ACATCAATCT GGACTAGGAA GAAGTGAAGG CTGTGCAGCG AATGAAGTGC TCTGTATGGT CCAGTTTAAA GAGAGTTGCC MRPS5P4 CCCCTGGGGG CCCTTGAGAA ATGATCCAGA GCTGGATGAT TAGGTTCCAG ACATCAATCT GGACTAGGAA GAAGTGAAGG CTGTGCAGCG AATGAAGTGC TCTGTATGGT CCAGTTTAAA GAGAGTTGCC MRPS5P1 Consensus cccc.ggggg cccttgag.a a.gatccaga gc..gatgat .aggttccag acatcaa.ct ggact.ggaa ga.gtgaag. ctg..cag.g aatgaag.gc tctgt.tggt c.agtttaaa gagag..gcc 1301 MRPS5 ACGTAA MRPS5P3 ACCTAA MRPS5P2 AGGTAA MRPS5P4 AGGTAA MRPS5P1 Consensus a.gtaa