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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 712 Check: 0 ..
Name: MRPL14_CDS Len: 712 Check: 7580 Weight: 0.75
Name: MRPL14_mRNA Len: 712 Check: 540 Weight: 0.75
Name: MRPL14P1 Len: 712 Check: 8291 Weight: 1.49
Name: Consensus Len: 712 Check: 7580 Weight: 0.00
//
1 130
MRPL14_CDS ATGGCT TTCTTTACTG GGCTCTGGGG CCCCTTCACC
MRPL14_mRN GGAAGAGGCC GCGTGGGGCG AAGGCGGCGC TTGGCTGGTG GGGCCCGCGG CGGGATTTTC CCGGGCGGCG AGAGCGGATC TATCTTGGGA TCCCATGGCT TTCTTTACTG GGCTCTGGGG CCCCTTCACC
MRPL14P1
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... ....atggct ttctttactg ggctctgggg ccccttcacc
131 260
MRPL14_CDS TGTGTAAGCA GAGTGCTGAG CCATCACTGT TTGCACACCA CTGGGAGTCT GAGTGCGATT CAGAAGATGA CGCGGGTACG AGTGGTGGAC AACAGTGCCC TGGGGAACAG CCCATACCAT CGGGCTCCTC
MRPL14_mRN TGTGTAAGCA GAGTGCTGAG CCATCACTGT TTGCACACCA CTGGGAGTCT GAGTGCGATT CAGAAGATGA CGCGGGTACG AGTGGTGGAC AACAGTGCCC TGGGGAACAG CCCATACCAT CGGGCTCCTC
MRPL14P1
Consensus tgtgtaagca gagtgctgag ccatcactgt ttgcacacca ctgggagtct gagtgcgatt cagaagatga cgcgggtacg agtggtggac aacagtgccc tggggaacag cccataccat cgggctcctc
261 390
MRPL14_CDS GCTGCATCCA TGTCTATAAG AAGAATGGAG TGGGCAAGGT GGGCGACCAG ATACTACTGG CCATCAAGGG ACAGAAGAAA AAGGCGCTCA TTGTGGGGCA CTGCATGCCT GGCCCCCGAA TGACCCCCAG
MRPL14_mRN GCTGCATCCA TGTCTATAAG AAGAATGGAG TGGGCAAGGT GGGCGACCAG ATACTACTGG CCATCAAGGG ACAGAAGAAA AAGGCGCTCA TTGTGGGGCA CTGCATGCCT GGCCCCCGAA TGACCCCCAG
MRPL14P1 AGGTAGGT GGGTGACCAG ATCCTGCTGG CCATCGAGGG ACAGGAGA-- --GGTGCTCA CCGTGGAGCA CAGTGT-CCT GGTACCCAGG TGGCCCC-AG
Consensus gctgcatcca tgtctataag aagaatggag tggGcaAGGT GGGcGACCAG ATaCTaCTGG CCATCaAGGG ACAGaAGAaa aaGGcGCTCA ttGTGGgGCA CtGcaTgCCT GGccCCCgaa TGaCCCCcAG
391 520
MRPL14_CDS ATTCGACTCC AACAACGTGG TCCTCATTGA GGACAACGGG AACCCTGTGG GGACACGAAT TAAGACACCC ATCCCCACCA GCCTGCGCAA GCGGGAAGGC GAGTATTCCA AGGTGCTGGC CATTGCTCAG
MRPL14_mRN ATTCGACTCC AACAACGTGG TCCTCATTGA GGACAACGGG AACCCTGTGG GGACACGAAT TAAGACACCC ATCCCCACCA GCCTGCGCAA GCGGGAAGGC GAGTATTCCA AGGTGCTGGC CATTGCTCAG
MRPL14P1 GTTCAACTCC AACACTGTGA TCCTCAATGG GGGTG----- ----CTGTGG GGACCCAAAT TCAGACACCC ATGCCCACCA GCCTACACCA GAGG
Consensus aTTCgACTCC AACAacGTGg TCCTCAtTGa GGacaacggg aaccCTGTGG GGACaCgAAT TaAGACACCC ATcCCCACCA GCCTgCgCaA GcGGgaaggc gagtattcca aggtgctggc cattgctcag
521 650
MRPL14_CDS AACTTTGTGT GA
MRPL14_mRN AACTTTGTGT GAGTTGAGCC CAGGCCTCTG GTTGCAGGAC TCGTGAATGG AGCAGTTCTG AGAACCACCC TTTTGCTAAG GGAGCTTGGG AGCCACATGG CTGCTCCCTT CACACTGGGT AACAGTGTAG
MRPL14P1
Consensus aactttgtgt ga........ .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
651 712
MRPL14_CDS
MRPL14_mRN TATCCTGTGA GAGAATAAAT GTATTCATTT AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AA
MRPL14P1
Consensus .......... .......... .......... .......... .......... .......... ..