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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 767 Check: 0 ..
Name: MRPL51_CDS Len: 767 Check: 105 Weight: 1.55
Name: MRPL51_mRNA Len: 767 Check: 5970 Weight: 0.62
Name: MRPL51P1 Len: 767 Check: 9718 Weight: 0.62
Name: MRPL51P2 Len: 767 Check: 6445 Weight: 1.22
Name: Consensus Len: 767 Check: 2237 Weight: 0.00
//
1 130
MRPL51_CDS
MRPL51_mRN CGGAT GGGGGCGTAG GTG-GGCGGT GTGCCCACAG ---CTGCCTG GGTAAGGCCC AAGATGGCTG TC-TTCGCCT TAGTACTCGT GTGAAGTTGG ---CGGGGAC GGTTCCTGT- ----------
MRPL51P1 GAACCAGTCT GCCTTTGTAG GAGTAACAAA TTAGCTACAA GATTAGAAAT TTTAAGGCCC AAGGTGGCTG CC-TTCACGT TAGTACCCGT GTGAAGTCGA ---CAGGGAC GGTTCCTGTT GTCTTCTTGA
MRPL51P2 ATGA GATTGGCA-T TTATCCACTG ATGTTACAAA AGCCAGCCAA GAAGTTAATG ACATTTTCAA GGTTTCGAAA GAGAAATAGT GTTCATATTT GAATCATATA TTCTACTAAA
Consensus .......... .......t.. g.....c... .t..c.ac.. .......... ....ag.c.. .a..t...tg .c.tt..c.. ...t.c.... g.gaa.t.g. ...c...... g..tc.t.t. ..........
131 260
MRPL51_CDS ATGGCAGGGA ACCTCT---- -TATCCGGGG CAGGT-AGGC GCCTGTGGGA CTGGGTGCCT
MRPL51_mRN ---------- CATCT----- ----TCTTGG GCTTATTTGG TGTGCTGTTG AAGGGGGGAG ACTAGAGAAA TGG-CAGGGA ACCTCT---- -TATCCGGGG CAGGT-AGGC GCCTGTGGGA CTGGGTGCCT
MRPL51P1 AGGC----CA CATCTGGTCC TCATTCTTGG GCTTATTTGG TGTGCTGTTG AAGGGGC-AG ACTAGAGAAA TGG-CAGGGA GCCTCT---- -TATGTAGGG CAGGT-AGGC GCCTGTGGGA CTAGGTG---
MRPL51P2 ATTCTATAAA AATATAGAAT TATATATAGA AAAATATAGA AAATATATTC TATAAAAATA CCCATATAGA GAATCATATA TTCTATAAAA ATATCCATCG CAAATTAAGT TCAACTAAAA CATTTTCAAA
Consensus .......... .at.t..... ....t.t.g. ......t.g. .....t.tt. .a........ .c.a.a.a.a ..g.CAgggA acCTcT.... .TATccgggG CAggT.AgGc gCctgTgggA CtgggTgcct
261 390
MRPL51_CDS CTGGCGTGCA GA-AGCTTCT CTCTTGGTGT GCCTAGATTG ATCGGTATAA GGCTCACTCT CCCGCCCCCC AAAGTGGTTG ATCGTTGG-A ACGAGAAGAG GGCCATGTTC GGAGTGTATG ACAACATCGG
MRPL51_mRN CTGGCGTGCA GA-AGCTTCT CTCTTGGTGT GCCTAGATTG ATCGGTATAA GGCTCACTCT CCCGCCCCCC AAAGTGGTTG ATCGTTGG-A ACGAGAAGAG GGCCATGTTC GGAGTGTATG ACAACATCGG
MRPL51P1 -TGGCATGCA GA-AGCTTCT TTCTTGGTAT TCCTAGATTG ATTGGTATAA GGCTC----- -CTACCCCCC AAAGTAGTTG ATCCTTGG-A ACGAAAGGAT GGCCATGTTC AGAGTGTATG ACAACATCAG
MRPL51P2 TAGAGCCTCA GAGAAGTGCT CACCTA-CAT AACTGAACTA AATGAAATAA AGAATATTTA TTCTTTAAAT AAGGTGGTTA ATCATTGGGA ATAAAAAGAG GGTCATCTTC AAAGTGTATG ACAGCACTGG
Consensus ctGgcgtgCA GA.AgcTtCT ctCtTggtgT gcCTagAtTg AtcGgtATAA gGctcactct cccgcccccc AAaGTgGTTg ATCgTTGG.A AcgAgAaGAg GGcCATgTTC ggAGTGTATG ACAaCAtcgG
391 520
MRPL51_CDS GATCCTGGGA AACTTTGAAA AGCACCCCAA AGAACTGATC AGGGGGCCCA TACGGCTTCG AGGTTGGAAA GGGAATGAAT TGCAACGTTG TATCCGAAAG AGGAAAA-TG GTTGGAAGTA GAATGTTCGC
MRPL51_mRN GATCCTGGGA AACTTTGAAA AGCACCCCAA AGAACTGATC AGGGGGCCCA TACGGCTTCG AGGTTGGAAA GGGAATGAAT TGCAACGTTG TATCCGAAAG AGGAAAA-TG GTTGGAAGTA GAATGTTCGC
MRPL51P1 GATCCTGGGA AACTTTGAAA AGCACCCCAA A-AGCTGATC AGGGACCCCA TATGGCTTCG AGATTGGAAG GGGAATGAAT TGCAACGCTG TATGCTAAAG AAGAAAA-TG GTTGGAAACA GAATGTTTGC
MRPL51P2 GATCCTGGGG GACTTTGAAA -GCCCACCAA AAAATTTCTT CGAATTCCCA AATGGTTTCA AGGATAGAAC AGGAATGTAT TGTTTCATTG CATCTGGAAG AAGAAAAATG GATGGACATC AGCTGTTCTT
Consensus GATCCTGGGa aACTTTGAAA aGCaCcCCAA AgAacTgaTc aGggggCCCA tAcGGcTTCg AGgtTgGAAa gGGAATGaAT TGcaaCgtTG tATccgaAAG AgGAAAA.TG GtTGGAagta gaaTGTTcgc
521 650
MRPL51_CDS TGATGACCTG CACAACCTTA ATAAACGCAT CCGCTATCTC TACAAACACT TTAACCGACA TGGGAAGTTT CGATAG
MRPL51_mRN TGATGACCTG CACAACCTTA ATAAACGCAT CCGCTATCTC TACAAACACT TTAACCGACA TGGGAAGTTT CGATAGAAGA GAAAGCTGAG AACTTC---G GAAAAGGCTC ATCTGTCACC CTGGAGAAGG
MRPL51P1 TGATGAGCTG CACAACCTCA ATAAACGCAT CAGCTGTCTC TACAAACACT TTAACTGACA TGGGAAATAT CGATAGAAGA GAAAGCTGAG AACTTC---A GAAAAGGCTC ATCTGTCACC CTGGAGAAGG
MRPL51P2 TGGTGACCA- CACAGCCTTA ACAATTACAT CGGCAGTCTT TATAAACAGT TTAACTAACA TAAGACTCAT -GGTAGATGA GAAAGTTGGG AGCTGCTATG GGAATGCCAC AGATGTCACC CTAAA-TAGG
Consensus TGaTGAcCtg CACAaCCTtA AtAAacgCAT CcGCtaTCTc TAcAAACAcT TTAACcgACA TggGAagttT cGaTAGa.ga gaaag.tg.g a.ct.c.... g.aa.g.c.c a..tgtcacc ct..a..agg
651 767
MRPL51_CDS
MRPL51_mRN GAAACTGTAC TTTTCCCTGT GAGGAAACGG CTTTGTATTT TCTCTGTAAT AAAATGGGGC TTCT-TCGAA AAAAAAAAAA AAAAAAAAAA A
MRPL51P1 GAAGCTGTAC TTTTCCTTAT GAGGAAACGG CTTTGTATGC TCTCTGTAAT AAAATGGGGC TTCT-TTGAA AAAAAAAAAA AGAAATTTTG ATTTAAAGGT CATCCAGCCT CTGGCTG
MRPL51P2 AAGACAATAC TGTACCTTAT GAGGAAAGGG TTTTGTGTGC TTTCTATAA- CAAATGGGGC TTCTCTGGAA CCTGCTATTT ACACACACTT TCCTTTAGGT GCTCCTTCTA CTCATTC
Consensus .a..c..tac t.t.cc.t.t gaggaaa.gg .tttgt.t.. t.tct.taa. .aaatggggc ttct.t.gaa ......a... a.a.a..... .......... .......... .......