Go directly to Alignment
Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 2029 Check: 0 ..
Name: MRPS35_CDS Len: 2029 Check: 9184 Weight: 2.26
Name: MRPS35_mRNA Len: 2029 Check: 3574 Weight: 0.52
Name: MRPS35P2 Len: 2029 Check: 5021 Weight: 0.52
Name: MRPS35P1 Len: 2029 Check: 3364 Weight: 0.76
Name: MRPS35P3 Len: 2029 Check: 2457 Weight: 0.94
Name: Consensus Len: 2029 Check: 8209 Weight: 0.00
//
1 130
MRPS35_CDS
MRPS35_mRN CTGACACTG AACGCCGCTT GTCCCCTCCG GCTTGCCGTC CTCGCAGCCA TGGCGGCCGC CGCGCTCCCA GCATGGCTGT CTCTGC---- ---AGTCGAG GGCAAGGACT C-TGCG--TG CATTCTCCAC
MRPS35P2 TCCCCATCTG AAGACCCTTA ATTTGATCAT GTCTACAGCC TCTTTTACCA TGTAAG--GC CAC---CTAT TCATTGTAGG TATTCC---- ---ATATAAG GCCACAGATC C---CA--AG GATTACAATG
MRPS35P1 TGCTTATT TATTACTGAA AATAGGGGTT TTAAGTCTTT ATTACTGCTG AATTGTCTAT TTCTCTTTAA TTCGGGCAGT TTTTGCTTCG TATATTTTGG AGCTCTGTTA TGTGCA--TA TATACTTATA
MRPS35P3 TTGCAA AAAGCTTATA ACTGGCTTCT ACCAGGTCTC CTGGGT-CTA TTCTTGATAC AACAGCCAGA CTGATTCTTT TAAAACA--- -CAAATCAGG CCCTACAGTA ATGGCAGCCA CGTGGTTCTT
Consensus .......... .a........ .......... .......... .......c.. .......... ..c....... .......... .....c.... ...a.....g ..c....... ....c..... ..t.......
131 260
MRPS35_CDS
MRPS35_mRN TGCCGTCTAC TC--GGCCAC TCCGGTCCCG ACACCTAGCC TGCCGGAAAG AACA-----C CCGGAAATGA AAGGCCACCA AGAAGAA-AG GCACTACCTC C--TAGGACA GAGAAAATGG CTGTTGACCA
MRPS35P2 TGACATCTCT GG--GGTTGG GGAGGTGTGG GTAT-TATTC AGCTTACAAC AATA-----A AGAATGAGTG TAGAAATATG AAGTTCG-TG GCCTTATTTG CAGTATGTCT TTATGCAAAG CCTTTTACAA
MRPS35P1 AGTATATTCC TCATGGATTG GATGGATTGA CCTTTTTGTC ATTGTAAAAT ATCT-----C CTTTGAAATT TTTGTCTTAA AGTCTAT-TT TGTCTAATAT TAGTGTAGCT ACTTCAGATC TCTTTGGTTA
MRPS35P3 AGCATCATCT GCCCGGC-AG GTGGCAAAGA TCCTGTGTAC CTTCTCCATC ATCAGATTTC CAGTCACTGA TGGGCCAAAG CCAAGACCAA GGCTTTATAT CAGAAAACAA TAAAACAACA ACAAAGGTAA
Consensus .g.....t.. ....gg.... ...g...... .....t...c .......a.. a......... .......... .......... .......... ....t..... .......... .......... .........a
261 390
MRPS35_CDS ATGGC AAAGGAGGGA AATCTAGAA-
MRPS35_mRN GGACTGGCCT AGTGTTTACC CAGTT---GC AGC--ACCAT TTA---AACC CTCTGCAGTA CCTCTTCCTG TTCGAATGGG TTATCCAGTA AA-AAAGGGC GTGCCATGGC AAAGGAGGGA AATCTAGAA-
MRPS35P2 ATCATTTCCA GGAAAATCCT TAGTTCTGGC AGAG-ACCTT TTATAAAAAC CACTTCAGTA TAAAATTGTC CTATTTTGCC ACTGCCAAGT TA-ACAAGCA GTTTAAC--C ACAGGCTGTT TTGCAAATG-
MRPS35P1 TTGTTTGTGT ATGTTTTATG TATTTTTTCT TCCA-AACGT ATTT--GTGC CT-TTAAATG TAAAGTA-TG TGAGTGTGCC ACTTGTAGGT AGGATATATT AAGGCTATCC TACTAGTTTC TATTTTTTG-
MRPS35P3 GTCTGGTCGA GAGAGACTCC TAGAACAGAA AACACAGCTG TTGACCCAGA CTGGGCTAGT CTTCTCCCTG TTGCAACACC ATTTAAATCT TTCAAAGCTC CTTTCAAAGC ACTTGAAATG GGTATTTTGA
Consensus .......... .......... .a........ .....a.c.. .t........ c......... ........t. .......... ......a... ...a.a.... .....atggC aaaggaggga aatctagaa.
391 520
MRPS35_CDS --CTTTTAAA GATTCCCAAT TT-TCTGCAT TTGACTCCTG TAGCAATTAA AAAGCACTGT ----GAAGCC CTTAAAGATT TTTGCACTGA GTGGCC-AGC CGCACTGGAC AGTGACGAGA AATGTGAGAA
MRPS35_mRN --CTTTTAAA GATTCCCAAT TT-TCTGCAT TTGACTCCTG TAGCAATTAA AAAGCACTG- ---TGAAGCC CTTAAAGATT TTTGCACTGA GTGGCC-AGC CGCACTGGAC AGTGACGAGA AATGTGAGAA
MRPS35P2 --TGATTTTA AACAGCCAAT TACTTTGGAT ATATTTATTA TTTTGTGTTC AGTGTAATGG CAATGAATTC AATGAATTAA TATTCACATA GTTGTC-ACA TGC-CATTTC --TAAAGAGT TCTCCTTGAG
MRPS35P1 --ATAGGTGA GTTAACCATT TCCATTTAAT ATAATTACTG ATGAGATAAG AGTTAAGTCT GCTATTTTAC CTTTTTTTCT ATGTCTTTTT TTGGCTTATC CTTTCATTAC TGTCATCTTT AGTGTTAAAC
MRPS35P3 CCCTAGAAAG GGGGTTCTAT GACAAAGGAG GGAAGCCAAA ACTTAAATAT TTCTGGCTTT CTACATTTGG CATGTGATTT CTG-CACTGA GTGGCC-AGC AGCATCAGAC --TTGTGAGA AATATGAGTA
Consensus ..cttttaaa gattccCaaT tt.tctgcAt ttgactcctg tagcaattaa aaagcacTgt ....gaagcc ctTaaagatt tttgCactga gTgGcc.Agc cgcactggaC agTgacgaga aaTgtgagaa
521 650
MRPS35_CDS GCATTTTCCA ATTGAAATTG AC-----AGC ACTG-ATTAT GTTTCATCAG GACCATCTGT TCGGAACCCC AGAGC-ACGA GTAGTAGTCT TAAGAGTAAA GCTTTCCAGT TTGAATTTAG ATGATCA-CG
MRPS35_mRN GCATTTTCCA ATTGAAATTG AC-----AGC ACTG-ATTAT GTTTC-ATCA GGACCATCTG TTCGGAACCC CAGAGCACGA GTAGTAGTCT TAAGAGTAAA GCTTTCCAGT TTGAATTTAG ATGATCA-CG
MRPS35P2 CCCAATGCTC ATTAGAATTT CCTAATAAAC ACTATAAAAT GACTCTATCC TGAAATATTG TCAAATTACA ATGGAAAAAA ATCACATACA CAAAATCCGT G-TAACCAGG CATAGGAATT CTGAGCATCT
MRPS35P1 AGATATTTTA AAATGTATTA TTTAAGTTTT ATAGTTATTT CTTTTATATT TGATTAATTT TCATAGTGGT TGCTCTGGGG ATTACAATGA ACACATTATA AAAATCTAGT TTGGCTTATT ATCAATTTAA
MRPS35P3 GCACTGCCCA ATTAAAACTC AT-----TTA ACTG-ATTAT GTTTCAGCAG AATTATCCAT TCAAAATCCC AAAG--TAGA GTAGGAACCT TATCGAGTAA ACTTTCCAAT CTGAATTTAA GTGATCAT-G
Consensus gcattttcca AttgaaAtTg ac.....agc Actg.attaT gttTcatcag ga.catct.t Tc.gaa.ccc agagc.acga gTagtAgtct taagagtaaa gctttCcAgt ttgaatttag aTgAtca.cg
651 780
MRPS35_CDS CAAAGAAGAA ATTAATTAAA CTTGTAGGAG AGCGATACTG CAAGACCACA GATGTGCTTA CCAT-CAAAA CAGATAGGTG CCCTTTAAGG A--------G GCAGAATTAC GATTATGCAG T---------
MRPS35_mRN CAAAGAAGAA ATTAATTAAA CTTGTAGGAG AGCGATACTG CAAGACCACA GATGTGCTTA CCAT-CAAAA CAGATAGGT- GCCCTTTAAG ---------- GAGGCAGAAT TA-----CGA TTATGC--AG
MRPS35P2 CCTTCCTTCT CTTTCTTTCT CTCTGTGTGT CTCTCTGTTT CTGTCTCTCT CTCTCTCTCT CCAT-CTGTC TGTATCTGTC TCTCTTTCTT TCT-CTATCT GCCTCTGTTT TTTTGAGCCC TTACTCTGAG
MRPS35P1 TAGTATGCAA AAATTTTGCT C-CTGTGTAG CTCTGAGGTT TCCCTTATTC TTGGTGCTTG TAATACAAAG TATATCTTTA TACATTAATT ATTGCTTCAT GCAGTTGTCT TTTAAATCAA ATA-----GG
MRPS35P3 TGAAGAAAAA ATATACTAAA CTTGCAAGAG AGCAATACTT TAAGACCACA GAAATGTTCA CCAG-CAAAA CGA------- ---------- ---------- -CAGAATTAT GATTATGCAA TT--------
Consensus caaagaagaa attaatTaaa Cttgtaggag agCgatacTg caagaccaca gatgtgcTta ccAt.Caaaa cagataggt. .cc.ttaa.g a......... gcagaattat gattatgCa. tt........
781 910
MRPS35_CDS -GTATCTACT AACAGTGTTA TA--CCATGA GTCTTGGAAT ACTGAAGAAT GGGAAAAAAG ------TAAG ACTGAAGCAG ACATGGAAGA GTATATATGG GAAAATAGCT CATCAGAAAG AAATATCCTG
MRPS35_mRN TGTATCTACT AACAGTGTTA TA--CCATGA GTCTTGGAAT ACTGAAGAAT GGGAAAAAAG ------TAAG ACTGAAGCAG ACATGGAAGA GTATATATGG GAAAATAGCT CATCAGAAAG AAATATCCTG
MRPS35P2 GGAAGCCAGT TACCATGTTG TGAGCAACTC TTATGGGGAG ACTCATTTGA GGAGAATCTG GTGTTTTCAG TCTAGAGTCA GCAATGACCT GAGCATGAGG TTGGAAGCAA TTAGAAAAAA AAAATTCCTG
MRPS35P1 ATAAGGCAGT A-----GTTA -----CAAAC AAAAAGGTTT ACA-AAGAAT GGAAACAAAA ------TAAG ACTGAAGCAG ATGTGGGAGA ATATATGTGG GAAAATAAAT CCTTGGGATA AAAAATCCTG
MRPS35P3 --TATCCACT CACA--GTTT -----CATAC CTTGAATCTT AAACCAGAGA GTAAGAGAAA ------AAAG ATGGAAGCAC ATGGGAAGGA ATATCTATGA -AAAACAGTT CATAAAAGAA AAATAT----
Consensus .gtAtctAcT aacagtGTTa ta..ccAtga gtcttggaat Actgaagaat Gggaaaaaag ......taAG actgaAGcag acatggaaga gtataTatGg gaaaAtagct catcagaaag AAAtaTcctg
911 1040
MRPS35_CDS GAAACGCTTC TCCAGATGAA AGCTGCTGAG AAAAATATGG AAATAAATAA AGAAGAGCTC CTTGGTACTA AAGAAATTGA AGAGTACAAA AAGTCTGTT- -----GTTAG TCTTAAAAAT GAGGAGGAAA
MRPS35_mRN GAAACGCTTC TCCAGATGAA AGCTGCTGAG AAAAATATGG AAATAAATAA AGAAGAGCTC CTTGGTACTA AAGAAATTGA AGAGTACAAA AAGTCTGTT- -----GTTAG TCTTAAAAAT GAGGAGGAAA
MRPS35P2 AAAACATTTA TCCAAATTAA AGCTGCTGAG AAATATAAGG AA-----TAA ATAAGAGCTT CTTGGTACCA AAGAAAC-GA AGATTACAGA ATGTCCTTT- -----GTTAG TCTTAAGAAT GAAGGGGAAA
MRPS35P1 GAAACATTTC TCCAAATTAA AGCTGCTAAG AAAAATTTGA AAGT---AAA GGAGGAGTAG GTTAGATCTA CTAGTAATGA GTTCTCTCAT ATTTCGTTTA TCTGGGAATG CCTTAATTTC ACCTTAGGTT
MRPS35P3 -AAAAAAATT TACAAATTAA AGCTACTGAT AAAAACA--- --------AA AAAAGAACAC TATTGTTCTA AACA-----A GGATCACAAA ATATCT---- -----GTTCA TTTTAAGAAT GAGAAGAAGG
Consensus gAAAcgctTc TcCAgATgAA AGCTgCTgAg AAAaAtatgg aaataaatAA agAaGAgctc ctTgGtaCtA aagaaattgA agagtacaaa AagTCtgtt. .....Gttag tcTTAAaaat gaggaggaaa
1041 1170
MRPS35_CDS ATGAAAATTC CATTTCTCAG TACAAAGAAT CCGTGAAGAG ACTATTAAAT -GTGACATGA
MRPS35_mRN ATGAAAATTC CATTTCTCAG TACAAAGAAT CCGTGAAGAG ACTATTAAAT -GTGACATGA ATTATGGAGT AGAAAAATCT GCTTGATTTA TTAATTTTA- TGATATATGT GATCAGTATC TAATTTGATA
MRPS35P2 ATGAAAATAC CCTTTCTCAG TACAAAGAAT CAGTGAAGAG ACTATTAAAT -TTGACATGA ATTATGAAGT AGAAAAATTT GCTTAATTTA TTAATTTTA- TGATATATGT AATCAATATC TAATTTGGCA
MRPS35P1 TTGAAAGATG -GTTTTGCTA GACATAGAAT TCTTG----G TCAATTATCT -TTTTCTGGT CAGGCACAGT GGCTCATGCC TATAATCCCA GCACTTTGGG AGGCCAAGGT GGGCGG-ATC -ACGAGGTCA
MRPS35P3 ATAAAAATAG CATGTCTAAG TACAAAGAAT CAGTGGAAAG GAAGGTACAT ATTGAATTGA CATGAATTAG AGTGAAAACA TACTTGATTA TCAATTCTAT CAGAATATCT ---CTATATA ATCCTTGTAT
Consensus aTgAAAattc caTtTctcag tACAaAGAAT ccgTGaagaG actatTAaaT .gTgacatGa .......... .g...a.... .........a ..a.tt.... ......a..t ...c...at. ......g...
1171 1300
MRPS35_CDS
MRPS35_mRN TAAAATTGAA AA-TGTT--- -AANAAAATC ATTTTTTTTC CTCAGAGTTA AAATTATTTC CCT--CATAC TAAT------ --GCTTAATG ----GCAATG ATTACTCCAG AGTTTTTTAA TTTTTACACT
MRPS35P2 TAACACTGTA AA-TGTTTTT TAAAAAAGTC TCTGAATTGA CTTTG-GAGA TAACTGCATC CCTGGCCAAC ACCTTGATTG CAGCCTCATG AGAGGCTCTG AGACAGACCC AGCTAGCTAA GCTGCTCACA
MRPS35P1 GGAGTTTGAG ACCAGCCTGG CCAATGTGGC GTAACCCTGT CTCTA--CTA AAAATACAAA AATTAGCTGG GCATGGT--- --GGCGCGTG ------CCTG TAATCCCAAC TACTCAGGGG GCAGAG-ACA
MRPS35P3 GATCTATATG TACAATAAG- --AATGTGGC TGACCTTTGT CCCCAGTTCC TGGGAGGTAA ACTG---TAA ACCTTT---- --GAAATGT- ------CCTG AGTGATTGTA GTGTCATTGT TATTTACGGT
Consensus ......t... .......... ..a......c .......t.. c......... .......... ..t....... ...t...... ..g.....t. ........tg .......... ...t...... ..........
1301 1430
MRPS35_CDS
MRPS35_mRN GGGGCA---- ----ATAGAC TAGGAGGTCT C---TGATTT CTTCTTGGTC TAAAGT-GTT TTGATTTTAT TT------CT ACATAATAGC TTTGGTATTC ATGTATATA- ---CATGCAT TTAATTGTGA
MRPS35P2 GGTGCCTGAC TCACAGAGCC TGTGAGATAA CAAATGCTTG TTGTTTGCAG TCATGACATT TTGAGGTAAT TTGTGAGGCA GCAATAGATA ACTAATACAC CAGCCTTGAG CATCTTAAAG TCTCATAAAA
MRPS35P1 GTAGAATTGC T---TGAACC TGGGAGGTGG AAGTTGCA-G CGAGCTGAGG TCATGCCATT GCACTCTAGT CTGGGCAACA GAGCAACACT CTGTCTCAAA ATTTTTTTTT TTAATTAAAA AAATTTTTTT
MRPS35P3 GG-GCACCTC ATACTATACC TGATAGTTTA TGCTAACAAA TGACTAAAGG TGGGAACTGG TCATGCTAGA AAG----ACC AACCATGTGG TTAACAGATT AGGCTTTCAG CAGTGTGATA TCAGCCGGAT
Consensus g..g...... .........c t...ag.t.. .......... .......... t......... ......t... ........c. .......... .......... .....t.... .....t.... ..........
1431 1560
MRPS35_CDS
MRPS35_mRN TTTTATCACC TTTCCCATTT CTTTCCCCAC AAGCTGGCAT TTCAGTA--G TTGCTTTTGA ATAATGGTTT TGGTTACCTG GGAAGGCAGG CC------CA GAACCCATTT C-CTTGACTT GCAGTTCCGG
MRPS35P2 AATTAGTAAC TTACTCAAGA CTGTACCTTC AACCAAATGT TGGATTTTGA CTACTCTGCA AAGGCAGAGG TGGAGGAAGG GGAGAGCTGA GCATAAGGCA AAACTCTGTT CACCCTAAAA GTTGGACCTG
MRPS35P1 TTTTAGCACT TTGAATATGT CATAT--TAC AGTCTTCTGT TTTTAATAGT TCTCATGGGA AATCCGCTGT TGATCATATC AAAGATCCCG -TGTATGTGA TGAGTTGCTT CTTTTGTTTT CAAGATTCTG
MRPS35P3 TTCTGGAAGG GGAAAAAGAG GAGAACTGAA GATTGAATCC AACCATGTGG CCAATGAGTC AATCAACATC ATGACTCAAT GCAGC-CTGA ATAAAAACTC TGGACACCAA AGCTAAGGTG AGCTTCCCTG
Consensus ...t...a.. ......a... .......... .......... .......... .......... a......... .......... ..a...c... .......... .......... .......... .......c.g
1561 1690
MRPS35_CDS
MRPS35_mRN GCT---GTGT TCACATGACT GCTGTCTAGC TG---A--TG CATTTTTCAC ATTTGTCAAC TCTGGTTAGA AACAGGTCCT CAGGAGTATT CTCTAACCTG ATATTTTCTA AAAAGATATG TTGATTCAAC
MRPS35P2 --T---GTAT TCCTATGACA -CTGACAAAG TGGACA--TG CTGAGAATAC ATTTGCATGG GGCACTTAAA AGCA--TCCT -GGGAATAAA CTCTT-CCTA AAAAGATTTG TTACATTAGT CAAGTCCTAG
MRPS35P1 TCTTCAGCTT TCTTTTTTTT TTTTTTTTGG ATTTAT--TT TTTTATTTTT ATTTTTTTAT TGTACTTTAA GTTTTAGGGT -ACATCTGCA CATTGTGCAG GTTAGTTACA TATGTATACA TGTGACATGC
MRPS35P3 GTTAGCAATA CTCTTTGAAC ATTGTCACAC TTCAAAGCTG GGAGGATAAC GTATCCCTGA AGACAACAGA AGCTTTGCAT TTGGAAACCT CCCAGAATTG GCTCTGTGCC TCTTTCTTTT TGATGGTTCT
Consensus ..t....... .....t.... ..t....... ........t. .......... .t.t...... .........a .........t .......... c......... ......t... ......t... ..........
1691 1820
MRPS35_CDS
MRPS35_mRN T--TTGTTTA GCATCCTACT TTCTAGATTG TGGGGCTCAT TTTGCCAG-- -GGCCAAG-C TACCAGAAAA GTAGAAGTGG AGATTACCTG GTATGTATCT CTCTGGGTGC CCCAGTTAGA GCTGCCACAG
MRPS35P2 TGTTAGAAAA GAGTGAACAC AGCTTGAT-G CTTTACTTAA ATGGACTGCT TGGCCTGGAC AAACAGGAAT GTGGAGAA-- AGCTGCTTTG GGAAAAATGA AATAAAGTTT TCTAGAAAAG ACAAGTATTC
MRPS35P1 TGGT-GCACT GCA-CCCACT AACTTCA--G CTTTCTACAG TTAGATTACA ATGATTCTAA ATGTGCATCT CTTTATATTT ATCCTACTCT GTAGATCTCT TTATGTTGAT CCTAGTTGTA TTTTTAAAGT
MRPS35P3 AACTTGTATC CTTTTGTTGT AATAAAACTG TAATCTTTAA GTATAGCACT TCCCTGAGTT CTGAGTCATT CTAGTGAGTT ATCAAACCTG AGGTGGAT-T ATGTGAATCC CCATATTTGT AGCCAGATGG
Consensus ...t.g.... .......... ......a..g ........a. .t........ .......... .......... .t........ a......... .......t.. .......... .c........ ......a...
1821 1950
MRPS35_CDS
MRPS35_mRN CTCAGGAAAA AGATGAGGCA TAACGACCTT ---GAATGTA ATTGGAGTAA GTGACAAAAT AAGAACTACC CTGGGAAA-C CCTGCATTCA ATGTAGCTGT CAATTCAGTA TTTTTAAGTA CACCTGTCAG
MRPS35P2 CAAAATTTCT GGGAGATGAT ATACTGACCA ---CAAAGCA GCTGTGCTTT GTG------- -----CT-CC CAGGGTGT-A ACTTTATCAT GAGGAAGAGG GGCTTCC--- -CTTGGAGTA CCTTGGACTG
MRPS35P1 TTGAATATAT AAATTTTTTT TCCATAAATT TGGGAAATTT TCAGTGGTTA TTTCTTCAAA TATTATTTCT ATTTCTGTTC CCTTTCTCCT CTTTTTCAGA TATTCCCA-- -TTATTCATA TGTTGGTATG
MRPS35P3 CCAGACATAA AGATAACCCG GGGGAAACCT -------GAA TTTGTGGCTG GCATTAGAGA ACAGTCTTCA GGGAGCTGTT CCCTCACACT ATGCAGCTTG CCTAAC---- --TCTAGGTA C-TATGTCAA
Consensus .......... .......... .......... .......... ...g...... .......... ......t.c. .......... .c........ .......... .....c.... ..t.....ta .....g....
1951 2029
MRPS35_CDS
MRPS35_mRN CTGTTT-CTT ACCACTTCGA TGGTTGTGAT TAATTTAAAA TCAAAATAAA GGAATTACTG AGTTTAAAAA AAAAAAAAA
MRPS35P2 CAGAGGGCAT AAGTGTGAAA TGGCACTACC TTCCCTGCC- TATGGAGAGG GGCCTGGAAG GGGTTTCACA GACAG
MRPS35P1 CTTGATG-AT ATCTCAAAGA TTTCTGAGTC TCTGTTCATT TTTCTCTTTT TTCCT-CCTC AGGATAGATA ATC
MRPS35P3 ATTTACTATA AATTCTAAAA CATTTCCTTA AAAACTGTTG TTT-TATAGG GGAATCAAAT TTATTCTTAC ATATATATG
Consensus .......... a........a .......... .....t.... t......... ....t..... ....t..... .........